Pairwise Alignments

Query, 345 a.a., AraC family transcriptional regulator from Pseudomonas fluorescens SBW25

Subject, 343 a.a., helix-turn-helix domain containing protein, AraC type from Marinobacter adhaerens HP15

 Score = 82.0 bits (201), Expect = 2e-20
 Identities = 71/309 (22%), Positives = 130/309 (42%), Gaps = 3/309 (0%)

Query: 34  DSHRLLRGTGLFHEDILAGNARLSPQQFLALIGNSRKLLDADDSSFLFGQRLLPGYYGAA 93
           D+  +LR  G+  + +    AR+S  QF  L+      +  D+   L  +R   G +   
Sbjct: 28  DTREMLREAGISPDLLRIEMARVSSDQFSHLMQVLWNRM-GDEFMGLGPRRARTGTFATM 86

Query: 94  SHALGHAQNLHQALDILIQQQVLLSPLVTLQLELDEHHAYLYWLDSCGAGEHWRFLLEAS 153
              +    NL        Q   L  P+V+++LE+ E  A L         +   FL E+ 
Sbjct: 87  CALVIDCPNLESVYRQAFQFSRLFEPMVSMELEIGEDKARLVARMEGEINDPSFFLRESI 146

Query: 154 MTSVVAMSQWLSGERLPWV-CSFSHAEPRYVEQYWVHLGEDTRFERPLDMLSLPREYLTR 212
           +     +  WL G+ +      F +  P + ++Y         FE     L+  + +L+ 
Sbjct: 147 LVIWHRLGSWLIGQPIELEKAEFDYPRPPHGDEYRHIFHCPLAFESDRIALTFDKRFLSA 206

Query: 213 AWPGASATAGQVARQQAREQIEQLGFAGSFLDCLYAYLHEQVRQP-PSLEQAAHAFAMSP 271
                     Q  +    + + +   + +F   + A +     +P P  E  A     SP
Sbjct: 207 PVIRDKPEMRQFLKTSPADLLSRPDESNTFTGRIRALIGRDFSKPLPDFEWIAAELHTSP 266

Query: 272 ATLKRKLHKHDTGFQQQVDRVRKQVALHLYQVKGYSNDEVAAYLNFNDAANFRRAFKRWT 331
            TL+R+L + +T FQ+  D +R+ +A++    +    +++AA + F + + F RAFK+WT
Sbjct: 267 QTLRRRLKQENTSFQEIKDLLRRDMAIYYLSRQDLPINDIAAKVGFTEPSTFHRAFKKWT 326

Query: 332 GSTPNLIRQ 340
           G TP   R+
Sbjct: 327 GVTPGAYRE 335