Pairwise Alignments

Query, 1023 a.a., error-prone DNA polymerase from Pseudomonas fluorescens SBW25

Subject, 1026 a.a., DNA-directed DNA polymerase III (polc) from Pseudomonas stutzeri RCH2

 Score = 1490 bits (3857), Expect = 0.0
 Identities = 743/1021 (72%), Positives = 840/1021 (82%), Gaps = 1/1021 (0%)

Query: 3    YAELHCLSNFSFQRGASSALELFERAKRQGYSALAITDECTLAGIVRAWQAAKAVELPLI 62
            YAELHCLSNFSFQRGASSA ELFERAKRQGY ALAITDEC+LAGIVRAWQA+K   LPLI
Sbjct: 5    YAELHCLSNFSFQRGASSARELFERAKRQGYDALAITDECSLAGIVRAWQASKDTGLPLI 64

Query: 63   IGSEVRIENGPKLVLLVEDLSGYQHLCRLITLARRRAEKGSYRLLLEDF-DQPLPGLLAL 121
            IGSE++IE GPKLVLLVE+L+GYQ LC+LIT ARRRAEKG Y+ L ED  D PL GLLA+
Sbjct: 65   IGSELQIEGGPKLVLLVENLTGYQALCQLITRARRRAEKGRYQALREDLRDWPLEGLLAI 124

Query: 122  WVAEDSDTQASIQWLRRTFAERLWLAVHLHCGQDDAHRLEQRLNLAASLRIPAVACGDVH 181
            W+ +     A  +WL   F ERLWL + LH G DDA +L Q L  A+ L I AVACGDVH
Sbjct: 125  WLPDHDGADAEGRWLLDRFRERLWLGIELHRGPDDALQLRQSLTQASRLGISAVACGDVH 184

Query: 182  MHARGRRALQDTMTAIRHHVPVAEAGTRLHPNGERHLRSLDALAALYPHALLDETQAIAR 241
            MHARGRRALQD MTAIRHH+PVAEAG  L PNGERHLRS + LA LYP  LL ET  I++
Sbjct: 185  MHARGRRALQDCMTAIRHHLPVAEAGRHLFPNGERHLRSREELAQLYPAELLAETLRISQ 244

Query: 242  RCTFDLSQLRYHYPRELVPEGHDAESWLRAVTEAGIAQRWPQGVDAHTLQQIHKELALIS 301
            RC F L QL+YHYP ELVP GHD  SWLR + E G   RWP G+      Q+  EL LI+
Sbjct: 245  RCHFQLDQLKYHYPHELVPPGHDTTSWLRKLVEDGARWRWPDGIPEKARAQLEHELELIA 304

Query: 302  ELGYESYFLTVHDIVRFARSRSILCQGRGSAANSAVCFALGITEIDPSLTSMLFERFLSK 361
            +L YESYFLTVHDIVRFAR + ILCQGRGSAANS+VCF LGITE+DP  + +LFERFLS+
Sbjct: 305  DLHYESYFLTVHDIVRFAREQGILCQGRGSAANSSVCFVLGITELDPVRSKLLFERFLSR 364

Query: 362  ERNEPPDIDVDFEHERREEVLQYVFQRYGRTRAALTAVVSSYHAAGAVRDVAKALGLPPD 421
            ERNEPPDIDVDFEH+RREEV+QYVFQRYGR RAALTAV SSY A GA+RDVAKALGLPPD
Sbjct: 365  ERNEPPDIDVDFEHDRREEVIQYVFQRYGRNRAALTAVASSYRATGALRDVAKALGLPPD 424

Query: 422  QVNALADCCGRWSDDAPPLERLREGGFDPQSPILRRVLTLTQQLIGFPRHLSQHPGGFVI 481
            Q+NALA CCGRWS+  P   +LRE GFDP +P+LRRVL LT  LIGFPRHLSQHPGGFVI
Sbjct: 425  QINALAGCCGRWSEHIPDDSQLREAGFDPDNPVLRRVLVLTDALIGFPRHLSQHPGGFVI 484

Query: 482  SEYPLDTLVPVENAAMAERTIIQWDKDDLDAVGLLKVDILALGMLSAIRRCFDLLRRHRN 541
            SE PLDTLVP+ENA+MA+RT+IQWDKDDLDAVGLLKVD+LALGMLSAIRRCFDL+  +R 
Sbjct: 485  SEQPLDTLVPIENASMADRTVIQWDKDDLDAVGLLKVDVLALGMLSAIRRCFDLIEHYRG 544

Query: 542  RDFSLASLPKEDPATYAMISKADTIGVFQIESRAQMSMLPRLRPQTFYDLVIEVAIVRPG 601
              +++A+LP ED  TY MIS+ADTIGVFQIESRAQM+MLPRLRP+TFYDLVI+VAIVRPG
Sbjct: 545  TRWTIATLPAEDKPTYEMISRADTIGVFQIESRAQMAMLPRLRPKTFYDLVIQVAIVRPG 604

Query: 602  PIQGGMVHPYLRRRNKEEETTYPSPELEVVLQRTLGIPLFQEQVMQIAMVAADYGPGEAD 661
            PIQG MVHPYLRRRNKEE+  YPS EL+ V +RTLG+PLFQEQVM++A+VAA+Y P EAD
Sbjct: 605  PIQGDMVHPYLRRRNKEEDVDYPSEELKPVFERTLGVPLFQEQVMELAIVAAEYTPDEAD 664

Query: 662  QLRRSMAAWKRHGGLEPHQERLRTGMLKNGYSEEFAAQIFEQIKGFGSYGFPESHAASFA 721
            +LRR+MAAWKRHG LEPH+ RL   ML  GY  +F A+IFEQIKGFGSYGFPESHAASFA
Sbjct: 665  KLRRAMAAWKRHGSLEPHRVRLTERMLAKGYQPDFIARIFEQIKGFGSYGFPESHAASFA 724

Query: 722  LLTYASCWLKCHEPAAFACALINSWPMGFYSPDQILQDARRHRLQIRPVDVQASDWDCSL 781
            LLTYASCWLK HEPAAFACALINSWPMGFY+PDQILQDARRH L+IRPVDV+ S WDCSL
Sbjct: 725  LLTYASCWLKRHEPAAFACALINSWPMGFYNPDQILQDARRHGLEIRPVDVRHSGWDCSL 784

Query: 782  EPIDGAQPAIRMGLRMIAGLREEEGRRIETARERGVFSDIADLDARAGLDARTQALLADA 841
            EP    QPAIR+GLRM+   RE + RRIE AR+R  F++I DL  RA L+ R +  LADA
Sbjct: 785  EPCSQEQPAIRLGLRMVRSFREADARRIEAARQRQPFTNIHDLCLRAELEPRAREQLADA 844

Query: 842  GALRALADNRHKARWEVAGVHKQLGLFAGLPSPDEAVVALPAPTVGEDLQADYATVGTTL 901
            G LR LA +RH+ARW VAGV  QL LFA LP+ +E  + LP P+V EDL  DYAT+GTTL
Sbjct: 845  GVLRGLAGHRHRARWAVAGVEPQLPLFASLPATEETPINLPLPSVSEDLLNDYATLGTTL 904

Query: 902  GPHPLALLRTELRKRRCRSSQELMLVEHGRNVSIAGLVTGRQRPGTASGVTFVTLEDEFG 961
            GPHPLALLR EL+ RRCRSS+EL ++EHGR VSIAGLV GRQRP TASGV FVTLEDEFG
Sbjct: 905  GPHPLALLRDELKARRCRSSRELAMIEHGRPVSIAGLVIGRQRPQTASGVIFVTLEDEFG 964

Query: 962  NLNVVVWRDLAERQRQALVGSRLLKVDGRWEAVGEVRHLIAGRLTDLTPLLEGIPVRSRD 1021
             +NVVVWRDLAERQR+ L+ S+LL+VDG  E+   VRHLIAGRL+DLTPLL G+ VRSRD
Sbjct: 965  MVNVVVWRDLAERQRRPLIQSQLLRVDGHLESASGVRHLIAGRLSDLTPLLTGLDVRSRD 1024

Query: 1022 F 1022
            F
Sbjct: 1025 F 1025