Pairwise Alignments

Query, 1023 a.a., error-prone DNA polymerase from Pseudomonas fluorescens SBW25

Subject, 1145 a.a., DNA polymerase III, alpha subunit from Marinobacter adhaerens HP15

 Score =  356 bits (914), Expect = e-102
 Identities = 291/1048 (27%), Positives = 492/1048 (46%), Gaps = 101/1048 (9%)

Query: 24   LFERAKRQGYSALAITDECTLAGIVRAWQAAKAVELPLIIGSEVRIENGP------KLVL 77
            L +R    G  A+ +T++  +  +VR ++AA    +  IIG+++ +EN        ++ L
Sbjct: 11   LIKRVAELGMPAVGLTEQSNMCSLVRFYKAAMGAGVKPIIGADLWLENPDEPENPFRITL 70

Query: 78   LVEDLSGYQHLCRLITLARRRAEKGSYRLLLEDFDQPLP-GLLALWVAEDSDTQASIQWL 136
            L  D  GY +L  +I+L     ++    ++   + +  P GL+AL  +   D   ++   
Sbjct: 71   LARDNDGYLNLTEIISLGYTEGQRFGKPIIQRKWLEARPNGLIALSGSRMGDVGKALMAG 130

Query: 137  RRTFAE---RLWLAVHLHC-----------GQDDAHRLEQRLNLAASLRIPAVACGDVHM 182
            +   A    R W+ ++              G +D   L   + LA +L +P VA  DVH 
Sbjct: 131  KPELARERARYWMDLYPDSYYLELQRTGRPGDEDCLHLS--VELAGALGLPVVATNDVHF 188

Query: 183  HARGRRALQDTMTAIRHHVPVAEAGTRLHPNGER------HLRSLDALAALY---PHALL 233
                     +   A    V + E+ T   P  +R      +LRS D +  L+   P A+ 
Sbjct: 189  LEA------EDFEAHEARVCIGESRTLDDPRRDRRFSDQQYLRSADEMIELFSDIPEAI- 241

Query: 234  DETQAIARRCTFDLSQLRYHYPRELVPEGHDAESWLRAVTEAGIAQRWPQGVDAHT---- 289
            + T  IARRC+  +    Y  P   +P+G   + + R V+E G+ +R  + +        
Sbjct: 242  ENTVEIARRCSVKVRMGEYFLPNYPIPDGMTMDDYFRKVSEEGLEERLAKTLSKDDPEYD 301

Query: 290  ------LQQIHKELALISELGYESYFLTVHDIVRFARSRSI-LCQGRGSAANSAVCFALG 342
                   ++++ EL +I ++G+  YFL V D +++A++  + +  GRGS A S V +A  
Sbjct: 302  AKREAYYKRLNFELDIIIQMGFPGYFLIVMDFIKWAKNNGVPVGPGRGSGAGSLVAYAQL 361

Query: 343  ITEIDPSLTSMLFERFLSKERNEPPDIDVDFEHERREEVLQYVFQRYGRTRAALTAVVSS 402
            IT++DP    +LFERFL+ ER   PD DVDF  E R+ V++Y  Q+YGR   +      +
Sbjct: 362  ITDLDPLEYDLLFERFLNPERVSMPDFDVDFCMEGRDRVIEYTAQKYGREAVSQIITFGT 421

Query: 403  YHAAGAVRDVAKALGLPPDQVNALADCCGRWSDDAPPLERLREGGFDPQ-------SPIL 455
              A   VRDVA+  G    +   LAD   +     P +   +    +PQ           
Sbjct: 422  MAAKAVVRDVARVQG----KSYGLADKLSKMIPFEPGMTLEKALEQEPQLVEFLENDEEA 477

Query: 456  RRVLTLTQQLIGFPRHLSQHPGGFVISEYPLDTLVPVENAAMAERTIIQWDKDDLDAVGL 515
            + +  +  +L G  R+  +H GG VI+   +    P+         + Q+DK D++  GL
Sbjct: 478  QEIWEMALKLEGVCRNAGKHAGGVVIAPTKITDFSPLYCDDEGGSLVTQFDKGDVEDAGL 537

Query: 516  LKVDILALGMLSAIRRCFDLLRRHRNR----DFSLASLPKEDPATYAMISKADTIGVFQI 571
            +K D L L  L+ I+   +++   R +       +  +P +D  ++ M+ KA+T  VFQ+
Sbjct: 538  VKFDFLGLRTLTIIKWALNMINPRREKKGMQPLDINEIPLDDVPSFDMLKKAETTAVFQL 597

Query: 572  ESRAQMSMLPRLRPQTFYDLVIEVAIVRPGPIQGGMVHPYLRRRNKEEETTYPSPE---- 627
            ESR    ++ RL+P +  D++  VA+ RPGP+Q GMV  ++ R++  +  ++P P+    
Sbjct: 598  ESRGMKDLIRRLQPDSLEDMIALVALFRPGPLQSGMVDDFIDRKHGRQPMSFPHPDYQYE 657

Query: 628  -LEVVLQRTLGIPLFQEQVMQIAMVAADYGPGEADQLRRSMAAWKRHGGLEPHQERLRTG 686
             L+ VL+ T G+ L+QEQVMQIA V A Y  G AD LRR+M   K+   +   ++    G
Sbjct: 658  GLKPVLEPTYGVILYQEQVMQIAQVMAGYTLGNADMLRRAMGK-KKPEEMAKQKQFFLDG 716

Query: 687  MLKNGYSEEFAAQIFEQIKGFGSYGFPESHAASFALLTYASCWLKCHEPAAFACALINSW 746
              +NG +   A  IF+ ++ F  YGF +SH+A++AL++Y + WLK H PA F  A++ + 
Sbjct: 717  CEQNGINTTLAENIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPAEFMAAVLTAD 776

Query: 747  PMGFYSPDQILQDARRHRLQIRPVDVQASDWDCSLEPIDGAQPAIRMGLRMIAGLREEEG 806
                     ++++ R  +L +   DV  S++  ++      +  I  GL  I GL E   
Sbjct: 777  MQNTDKVVTLVEECRNMKLDLLVPDVSRSEYTFTVND----EGQIVYGLGAIKGLGEGPI 832

Query: 807  RRIETARERG-VFSDIADLDARAGL---DARTQALLADAGALRALADNR----------- 851
            + I   R  G  F DI D   R  L   + R    L  +GA+  L  +R           
Sbjct: 833  QSIVEGRGDGEPFQDIFDFCRRVDLKKVNKRAMEALIRSGAMDKLGASRAQLMASIDKAV 892

Query: 852  ----HKARWEVAGVHKQLG--LFAG-LPSPDEAVVALPAPTVGEDLQADYATVGTTLGPH 904
                 ++R E  G+    G  L AG    P E V  +      + L+ +  T+G  L  H
Sbjct: 893  QQADQQSRNESVGMMDMFGEMLEAGDGGDPYEDVAGVREWPEKQRLKGEKDTLGLYLTGH 952

Query: 905  PLALLRTELRKRRCRSSQELMLVEHGRNVSIAGLVTGRQRPGTASGVT--FVTLEDEFGN 962
            P      E+R+    S  +L   +  + V  AGLV  ++   T +G T  F+TL+D    
Sbjct: 953  PFDEYEKEVRRFVRSSIADLKPNKSPQRV--AGLVVAQRTMKTRTGSTMCFITLDDRSAR 1010

Query: 963  LNVVVWRDLAERQRQALVGSRLLKVDGR 990
            +   ++ +     R+ L   +++ V+G+
Sbjct: 1011 IEATLFSEAFFENRELLQSDQVIVVEGQ 1038