Pairwise Alignments

Query, 346 a.a., hypothetical protein from Pseudomonas fluorescens SBW25

Subject, 337 a.a., BNR repeat-containing protein (RefSeq) from Shewanella loihica PV-4

 Score =  193 bits (490), Expect = 6e-54
 Identities = 119/346 (34%), Positives = 174/346 (50%), Gaps = 46/346 (13%)

Query: 13  RVALLATALSLLVGGVSVTPALAASDTVATPAFAIESPKAAKGLMIDVVHAGKRLVAVGD 72
           R+  L++   + +GG      +  SD           P A   L++D+   G+ ++AVGD
Sbjct: 7   RLVALSSLCFVTLGGAQAATEVTGSDI---------QPLATHSLVLDIAKQGETMIAVGD 57

Query: 73  RGHILYSDDQGSTWTQAKVPTRQLLTAVFFIDDKQGWAVGHDAQILASSDGGATWTQQYQ 132
           RGH+    D   +W Q   P+R LLT    +  + GWAVGHDA IL + DGG +W +Q +
Sbjct: 58  RGHLFRFTD---SWQQVGSPSRALLTKATLLTPELGWAVGHDATILHTQDGGNSWVEQMR 114

Query: 133 DLKREAPLLDVWFNDANHGLAVGAYGALIETTDGGKTWQD-------------VSDRLDN 179
             + E P LDV F DA HG+A+GAYG    T DGGK WQ                D L  
Sbjct: 115 SPEIEKPFLDVLFFDAEHGIAIGAYGLFYRTQDGGKQWQQEFHTELLYEEDQAYLDELKA 174

Query: 180 EDQF-----------HLNAIAHIKDAGLFIVGEQGSMFRSSDDGQTWEKLEGPYEGSLFG 228
           ED+            H N +  + D  L +VGE G   +S D+G TW+++E PYEGSLF 
Sbjct: 175 EDESLYLKERSTLLPHFNRVVRLADDRLLMVGELGLAAQSQDNGLTWQRIEFPYEGSLFN 234

Query: 229 VISTAQPQTLLAYGLRGNLYRSTDFGSTWEPVELNAARGALEFGLSGATLLEDGSLVVVG 288
           ++     Q +   GLRG+L++S      W+ +EL       +  L+G  +L D  + +VG
Sbjct: 235 IL--VAKQGIYVLGLRGHLFKSEGDLEQWQEIELTT-----KSTLNGGVVLSDDKVRLVG 287

Query: 289 NGGSVV-VSHDDGVTFSVFNRPDRISLSSVTAAGNGNLILAGQGGV 333
           NGG V+ V+ DD VT     + +  +L ++     G L +AG  G+
Sbjct: 288 NGGVVIDVASDDSVTMVTQRQGE--NLVAIGQDRTGTLWIAGTKGL 331