Pairwise Alignments

Query, 310 a.a., DUF58 domain-containing protein from Pseudomonas fluorescens SBW25

Subject, 327 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  182 bits (461), Expect = 1e-50
 Identities = 116/298 (38%), Positives = 172/298 (57%), Gaps = 6/298 (2%)

Query: 4   SDGIRVTLSELIEMRHRVREVQLFSTPSQRSPLIGLHHSKLRGRGVDFDQVRVYQAGDDV 63
           +DG+ +T  EL+  +   R +    + + R+ L G   S ++GRG++F +VR YQ GDDV
Sbjct: 28  ADGLHLTEKELLACQTIARAIPERHSRA-RANLAGHRSSLIKGRGMEFAEVRHYQQGDDV 86

Query: 64  RTIDWRVTARTQEPHTKLFHEERERPIFIMVEQSCRLFFGSGQMFKSVLAAQAASLIGWA 123
           RTIDWRVTART + HTKLF EERERPI ++++ S  L+FGS  + +SV A   A+ +GW 
Sbjct: 87  RTIDWRVTARTGQTHTKLFIEERERPILLLLDLSQSLYFGSSLLLQSVQAGHLATTLGWN 146

Query: 124 ALEHNDRVGGLVFGDSEHYEIKPRRSKQSLLQLLNRLVRVN-QSLN-TESRP-EADALGM 180
           A+ H DR+G L+  +SEH E+KPR  +Q +LQL++ L RV+ Q LN   S P + D +  
Sbjct: 147 AINHGDRLGALIACESEHLELKPRSRRQGILQLISGLCRVHEQQLNQLGSHPRDPDHILR 206

Query: 181 ALRRGREVLRPGSLVIVICDERALTEGAEQQLSLLSRHCDLLLLPISDPL-DHALPAAGL 239
           A +R + + +PGSL+ +I D    T      L+ L RHCD+    I+DPL   +L     
Sbjct: 207 ACQRLQRIAKPGSLIWIITDGSHFTPQCIAPLTELKRHCDIGAYLITDPLRQGSLNLPKQ 266

Query: 240 LRFAERGAQLELDTLNYDLRQAYKAQAEGRIARWELLAQKLRILLMPLSTQSEMVEQL 297
                R A+ +L  L +   QA+ A    +   +  + QKLR+    +     + EQL
Sbjct: 267 FSLPVRDAEQDL-VLTHHSYQAWLALQHQQQNDFIAMMQKLRVHTQFIDAGRPLAEQL 323