Pairwise Alignments

Query, 397 a.a., site-specific integrase from Pseudomonas fluorescens SBW25

Subject, 311 a.a., Probable integrase/recombinase from Mycobacterium tuberculosis H37Rv

 Score = 43.5 bits (101), Expect = 8e-09
 Identities = 38/151 (25%), Positives = 68/151 (45%), Gaps = 18/151 (11%)

Query: 211 AFFEFVFFTGMRLSEALAMRWDEVDEQKKTAHVCRGVALGEVVERTKTGGDRFVLLNDRA 270
           A  E ++ TG R+SEA+ +  D++D   ++           V+ R K G  R V +   A
Sbjct: 149 AVLELLYSTGARISEAVGLDLDDIDTHARS-----------VLLRGKGGKQRLVPVGRPA 197

Query: 271 LHALD--FAKEYAERRKKGKGKVLETPYIFPPSKNAAYVRQTSDLHKQWVPTLKALNIRR 328
           +HALD    +   +  ++G+G    T  IF  ++     RQ++    Q       +    
Sbjct: 198 VHALDAYLVRGRPDLARRGRG----TAAIFLNARGGRLSRQSAWQVLQDAAERAGIT-AG 252

Query: 329 RPPYNCRHTYATICIMSGMNPAFISQQLGHS 359
             P+  RH++AT  +  G +   + + LGH+
Sbjct: 253 VSPHMLRHSFATHLLEGGADVRVVQELLGHA 283