Pairwise Alignments

Query, 508 a.a., L-arabinose ABC transporter ATP-binding protein AraG from Pseudomonas fluorescens SBW25

Subject, 500 a.a., ribose import ATP-binding protein RbsA from Vibrio cholerae E7946 ATCC 55056

 Score =  390 bits (1001), Expect = e-113
 Identities = 217/501 (43%), Positives = 326/501 (65%), Gaps = 10/501 (1%)

Query: 12  AQLSFNGIGKTFPGVKALDGISFTAYPGQVHALMGENGAGKSTLLKILGGAYIPSSGTLQ 71
           A L+ + I K FPGVKALD  S   YPG+V ALMGENGAGKSTL+K+L G Y   +G+++
Sbjct: 4   AILALSQIEKAFPGVKALDKASLNVYPGRVMALMGENGAGKSTLMKVLTGIYSKDAGSIE 63

Query: 72  IGEQTMAFKNAADSIASGVAVIHQELHLVPEMTVAENLFLG-HLPSRFGVVNRSLLRQQA 130
              Q ++FK   DS  +G+++IHQEL+L+P++T+AEN+FLG  + S FG +    + ++A
Sbjct: 64  YQGQPVSFKGPRDSQLAGISIIHQELNLIPQLTIAENIFLGREMTSPFGRILWDEMHRKA 123

Query: 131 LACLKGLADEIDPQEKLGRLSLGQRQLVEIAKALSRGAHVIAFDEPTSSLSAREIDRLMA 190
              L  L  +   +  LG LSLG++Q+VEIAKALS  + VI  DEPT +L+  E + L  
Sbjct: 124 DQLLARLNVKHSAKTLLGELSLGEQQMVEIAKALSFESKVIIMDEPTDALTDTETESLFN 183

Query: 191 IITRLRDEGKVVLYVSHRMEEVFRICNAVTVFKDGRYV---RTFDDMSALTHDQLVTCMV 247
           +I  LR++G  ++Y+SHR++E+F IC+ +TV +DG+++   R  D       D L+  MV
Sbjct: 184 VINELREQGCGIVYISHRLKEIFEICDDITVLRDGKFIGECRVCD----TNEDGLIEMMV 239

Query: 248 GRDIQDIYDYRPREQGEVALKVDGLLGPGLREPISFNVRKGEILGLFGLVGAGRTELFRL 307
           GR +++ Y     +QG+++L+V GL G G+ + +SF ++KGEILG+ GL+GAGRTEL ++
Sbjct: 240 GRKLEEQYPRIAAQQGDISLEVIGLTGSGVHD-VSFTLKKGEILGVSGLMGAGRTELMKV 298

Query: 308 LSGLERASAGQLELCGQALQLRSPRDAIAAGVLLCPEDRKKEGIIPLSSVAENINISARG 367
           + G   +  G + L G+ +   SP+D +A G+    EDRK +G++   SV EN+++ A  
Sbjct: 299 IYGALPSERGVINLNGRTVNPVSPQDGLANGIAYISEDRKGDGLVLGLSVKENMSLCALD 358

Query: 368 AHSAFGWLLRDGWEKRNADQQIQAMKVKTPNAAQKIMYLSGGNQQKAILGRWLSMPMKVL 427
             S  G  +R   E    D  I+   +KTP+  Q I  LSGGNQQK  + + L    KVL
Sbjct: 359 QLSK-GVQIRHADEVIAVDDFIRLFNIKTPSREQIIGNLSGGNQQKVAIAKGLMTKPKVL 417

Query: 428 LLDEPTRGIDIGAKAEIYQIIHNLAAQGIAVIVVSSDLMEVMGISDRILVLCEGAMRGEQ 487
           +LDEPTRG+D+GAK EIYQ+I+   A+G+++I+VSS++ EV+G+SDRILV+ EG + GE 
Sbjct: 418 ILDEPTRGVDVGAKKEIYQLINQFKAEGMSIILVSSEMPEVLGMSDRILVMHEGRISGEF 477

Query: 488 TREHATESNLLQLALPRSLAN 508
               A +  L+  A+ R+ A+
Sbjct: 478 MASEADQEKLMACAVGRNPAH 498