Pairwise Alignments

Query, 310 a.a., ABC transporter ATP-binding protein from Pseudomonas fluorescens SBW25

Subject, 313 a.a., ABC transporter-related protein (RefSeq) from Shewanella loihica PV-4

 Score =  397 bits (1021), Expect = e-115
 Identities = 202/300 (67%), Positives = 239/300 (79%)

Query: 4   ALSIRQLTKTYGNGFQALSGIDLDVAEGDFFALLGPNGAGKSTTIGILSTLVNKTSGTVN 63
           AL I  L KTY  G +A+ GI L V  GDFFALLGPNGAGKSTTIG++ +LV K+SG V 
Sbjct: 7   ALVIDSLRKTYKGGVEAVKGISLKVEAGDFFALLGPNGAGKSTTIGVICSLVQKSSGKVK 66

Query: 64  IFGHDLDKSPAALKRSIGVVPQEFNFNQFEKTFDIVVTQAGYYGIPAKVAKERAEQYLTQ 123
           +F HD+D      K SIG+VPQEFNFNQFE    IVV QAGY+G+  +VA ERA++YL+Q
Sbjct: 67  VFEHDIDTQLELAKMSIGLVPQEFNFNQFETVQQIVVNQAGYFGVSREVAFERAKKYLSQ 126

Query: 124 LGLWDKRDVPSRSLSGGMKRRLMIARALVHEPRLLILDEPTAGVDIELRRSMWTFLTELN 183
           L LWDKR+ PSR+LSGGMKRRLMIARAL+HEP+LLILDEPTAGVDIELRRSMWTFLT+LN
Sbjct: 127 LDLWDKRNSPSRALSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLTDLN 186

Query: 184 EKGITIILTTHYLEEAEQLCRNIGIIDHGTIVENTSMRNLLGQLHVETFLLDLKNNLSVP 243
            +G+TIILTTHYLEEAE LCRNIGIID G +VE TSM++LL +L++ETF+ DLK +++  
Sbjct: 187 RQGVTIILTTHYLEEAEMLCRNIGIIDKGELVECTSMKSLLSRLNMETFVFDLKADINEA 246

Query: 244 PQLLGYPSRLVDSHTLEVQVDKAMGITALFTQLATQNIEVLSLRNKTNRLEELFVSLVEK 303
           P L G   RL D HTLEV V+KA  I ++F QL  Q IEVLS+RNK NRLEELFV LVE+
Sbjct: 247 PTLEGISCRLTDPHTLEVDVEKAHSINSVFAQLTEQGIEVLSMRNKANRLEELFVELVEQ 306