Pairwise Alignments

Query, 310 a.a., ABC transporter ATP-binding protein from Pseudomonas fluorescens SBW25

Subject, 312 a.a., ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  394 bits (1013), Expect = e-114
 Identities = 199/300 (66%), Positives = 238/300 (79%)

Query: 4   ALSIRQLTKTYGNGFQALSGIDLDVAEGDFFALLGPNGAGKSTTIGILSTLVNKTSGTVN 63
           AL +  L KTY  G +A+ GI L V +GDFFALLGPNGAGKSTTIGI+S+LV KT+G+V 
Sbjct: 7   ALVLEGLKKTYKGGVEAVKGISLTVEQGDFFALLGPNGAGKSTTIGIISSLVQKTAGSVK 66

Query: 64  IFGHDLDKSPAALKRSIGVVPQEFNFNQFEKTFDIVVTQAGYYGIPAKVAKERAEQYLTQ 123
           +F  D+DK     K  IG+VPQEFNFNQFE    IVV QAGYYG+P  VA ERA++YLTQ
Sbjct: 67  VFDFDIDKQLEEAKLCIGLVPQEFNFNQFETVLQIVVNQAGYYGVPKAVALERAQKYLTQ 126

Query: 124 LGLWDKRDVPSRSLSGGMKRRLMIARALVHEPRLLILDEPTAGVDIELRRSMWTFLTELN 183
           L LW+KR+  SR+LSGGMKRRLMIARAL+HEP+LLILDEPTAGVDIELRRSMW FL ++N
Sbjct: 127 LDLWEKRNSQSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWEFLKQIN 186

Query: 184 EKGITIILTTHYLEEAEQLCRNIGIIDHGTIVENTSMRNLLGQLHVETFLLDLKNNLSVP 243
           ++G+TIILTTHYLEEAE LCRNIGIID G +VE TSM+ LL +L++ETF+LDL+ ++ V 
Sbjct: 187 QQGVTIILTTHYLEEAEMLCRNIGIIDKGVLVECTSMKALLSKLNLETFILDLRRDIYVA 246

Query: 244 PQLLGYPSRLVDSHTLEVQVDKAMGITALFTQLATQNIEVLSLRNKTNRLEELFVSLVEK 303
           P L G   RL D HTLEV V K   +  +FTQL   N+EVLS+RNK+NRLEELFV LV+K
Sbjct: 247 PTLDGMVCRLTDPHTLEVDVAKEHNLNDVFTQLTAANVEVLSMRNKSNRLEELFVELVKK 306