Pairwise Alignments

Query, 296 a.a., pseudouridine synthase from Pseudomonas fluorescens SBW25

Subject, 305 a.a., pseudouridine synthase (RefSeq) from Shewanella sp. ANA-3

 Score =  206 bits (524), Expect = 5e-58
 Identities = 114/271 (42%), Positives = 157/271 (57%), Gaps = 13/271 (4%)

Query: 25  TVLDCLCEHFPAIAREHWLDRIARGRVLDINGSPISLDLAYKEGLCIYYFREVPNEKVIP 84
           TV   L EH+  I    W  RI  G+V   +GS I LD AY+     YY+REVP E  +P
Sbjct: 24  TVFSFLIEHYAHIGEAVWRQRILDGKVHWQDGSLIGLDTAYRPTARAYYYREVPVETQVP 83

Query: 85  VQETILYADEHLVVADKPHFLPVTPAGEYVEQTLLRRLIRCLDNPALVPLHRIDRHTAGL 144
            +  IL+ D++L++A KPHFLPVTP+G+YV + L+ RL        + P HR+DR TAG+
Sbjct: 84  FESPILFQDDNLILAYKPHFLPVTPSGDYVNECLVHRLRLSTGIDTIAPAHRLDRETAGV 143

Query: 145 VLFSANPASRSAYQQLFPTRQIDKFYEAIAPALP---------NLTFPRVH---KSRLVE 192
           +L +  P +R  Y QLF    I K Y+AIA   P          LT P +H   K+R+  
Sbjct: 144 ILMTTRPETRHIYHQLFIDDAIRKDYQAIAKLTPEIMAQYASGELTLP-LHWTVKNRMQR 202

Query: 193 GEPFFRMQEGPGASNTETAVEVREKKADLWRYGLFPVTGKKHQLRVHMTALGASICNDPF 252
            EP F M+   G +NT + + +     +L  + L P+TGK HQLRVHM +LG  + ND F
Sbjct: 203 SEPSFTMKIVEGEANTHSEISLVAIHGELGLFELSPITGKTHQLRVHMQSLGMPLLNDRF 262

Query: 253 YPDVIKDAVDDYANPLKLLAQGVLFIDPVTG 283
           YP +     DD++ PL+LLAQ + FIDP++G
Sbjct: 263 YPTLYPKGPDDFSKPLQLLAQRLRFIDPISG 293