Pairwise Alignments

Query, 235 a.a., helix-turn-helix transcriptional regulator from Pseudomonas fluorescens SBW25

Subject, 212 a.a., TetR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  187 bits (476), Expect = 1e-52
 Identities = 99/204 (48%), Positives = 135/204 (66%), Gaps = 2/204 (0%)

Query: 3   QSETVERILDAAEQLFAEKGFAETSLRLITSKAGVNLAAVNYHFGSKKALIQAVFSRFLG 62
           +S+T  RILDAAE+LFAE+GF+ETSLRLITSKA VNLA+VNYHFGSKK LI+AV +R+L 
Sbjct: 4   RSDTKTRILDAAEKLFAERGFSETSLRLITSKAEVNLASVNYHFGSKKELIRAVLARYLD 63

Query: 63  PFCASLDRELERRQAKAEHKPTLEELLEILVEQALVVQPRSGNDLSIFMRLLGLAFSQSQ 122
            F       +   Q K   +P+L E+   LV+  L +     +    F++LLG  + +SQ
Sbjct: 64  RFMPEASDAVV--QLKQASEPSLNEIFSSLVKPLLELNKFKADGTRTFLQLLGRGYIESQ 121

Query: 123 GHLRRYLEDMYGKVFRRYMLLVNEAAPRIPPIELFWRVHFMLGAAAFSMSGIKALRAIAE 182
           GHLR ++   YG+    ++  V E+AP IPP E+FWR+HF LG   F+M+   AL  IAE
Sbjct: 122 GHLRWFITTHYGEHLSEFVKAVAESAPHIPPAEMFWRLHFTLGTVVFTMASADALTEIAE 181

Query: 183 TDFGVNTSIEQVMRLMVPFLAAGM 206
            DF  +  IE V+R ++P+LAAG+
Sbjct: 182 ADFNEHNDIEAVIRKVIPYLAAGV 205