Pairwise Alignments

Query, 715 a.a., fatty acid oxidation complex subunit alpha FadB from Pseudomonas fluorescens SBW25

Subject, 706 a.a., multifunctional fatty acid oxidation complex subunit alpha (RefSeq) from Shewanella loihica PV-4

 Score =  459 bits (1182), Expect = e-133
 Identities = 281/715 (39%), Positives = 414/715 (57%), Gaps = 18/715 (2%)

Query: 6   KAITVKALESGIVELKFDLKGESVNKFNRLTLNELRQAVDTIKADASIKGVIVSSGK-DV 64
           K+ T+  L++GI  L  D+ GE++N        E+ + +  IKADA I+GV++ SGK D 
Sbjct: 3   KSFTLNRLDNGIAVLTMDVPGETMNTLRAEFGPEICEMLAEIKADAGIRGVVIISGKKDS 62

Query: 65  FIVGADITEFVDNFKLPDAELVAGNLEANKIFSDFEDLNVPTVAAINGIALGGGLEMCLA 124
           F+ GADI+         DA  ++   + +++F   E L++P VAAING  LGGGLE+ LA
Sbjct: 63  FVAGADISMLDACATAEDARELSK--QGHEVFFALESLSIPVVAAINGACLGGGLELALA 120

Query: 125 ADFRVMSATAK--IGLPEVKLGIYPGFGGTVRLPRLIGADNAIEWIAAGKENRAEDALKV 182
              RV + + K  +GLPEV+LG+ PG GGT RLPRL+G   +++ +  GK+ RA+ ALK+
Sbjct: 121 CHQRVCTDSNKTMLGLPEVQLGLLPGGGGTQRLPRLVGIAKSLDMMLTGKQLRAKQALKM 180

Query: 183 GAVDAVVAPDKLAEAALNLIKGAISGEFDYKAKRQPKLEKL-KLNAIEQMMSFETAKGFV 241
           G VD VV    L + A+ +   A++G    K  +   +EKL +   + + + FE A   V
Sbjct: 181 GLVDDVVPESILLQTAIEM---ALAGARPAKKPKLSTVEKLLEGTPVGRNIIFEQALKQV 237

Query: 242 AGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTSAAQSLIGLFLNDQELK 301
             +   NYPAP + I  +++    G  K LEVEA  F  L  ++ +++L  +F    E+K
Sbjct: 238 NKKTQGNYPAPEKIIDCVRQGVTKGIVKGLEVEAQHFGDLVVSNESEALRSIFFATTEMK 297

Query: 302 KKAKAYDEIARDVKQAAVLGAGIMGGGIAYQSASKGT-PILMKDINEHGIEQGLAEAAKL 360
           K++ A D   + V +  VLG G+MGGGIA  + +K   P+ +KDI+E G+   LA A KL
Sbjct: 298 KESGAGDVSPKAVNKVMVLGGGLMGGGIASVTTTKAKIPVRVKDISEIGLSNALAYAYKL 357

Query: 361 LVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENPKVKQAVLAEVEAQVK 420
           L   V +  MT A    ++  +  T  Y      D+VVEAV E+  +K  ++ +VE +  
Sbjct: 358 LAKGVKRRHMTPAVRDNLMALMTTTTEYKGIKDADMVVEAVFEDLNLKHQMVKDVERECG 417

Query: 421 DDTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSELAVATTVA 480
           + TI ASNTS++ I  +A+A +RPEN +G+H+F+PV  MPLVEVI  +K+S   +ATTVA
Sbjct: 418 EHTIFASNTSSLPIKQIAEAAERPENVIGLHYFSPVEKMPLVEVIAHDKTSPQTIATTVA 477

Query: 481 YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEKFGWPMGPAYL 540
           +A+K GK PIVV D  GF VNR+L  Y    A L+  G     +DK + KFG+P+GP  L
Sbjct: 478 FARKQGKTPIVVKDGAGFYVNRILALYMNEAANLLLEGQSVDHLDKALVKFGFPVGPMTL 537

Query: 541 MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDALYEAKRLGQKNGKGFYAYEADKKGKQ 600
           +D VGID G     ++ +   +R K    +A D L    R G+KNGKGFY Y A  K   
Sbjct: 538 LDEVGIDVGAKISPILEKELGERFK--APAAFDKLLADDRKGRKNGKGFYQYGAKSK--- 592

Query: 601 KKVADPSVHEVLAPVIYEQREVSDEDIINWMMIALCLETVRCLEDGIVETAAEADMGLVY 660
           KK+ D SV+ VL   +    +     +    ++ +  E VRCLE+GI+ +  + D+G ++
Sbjct: 593 KKLVDESVYGVLG--LTPGADGEPIALAERCVVQMLNEAVRCLEEGIIASPRDGDIGAIF 650

Query: 661 GIGFPPFRGGALRYIDSIGVAEFVALADKYAD-LGPLYHPTAKLREMAKNGQSFF 714
           GIGFPPF GG  RY+DS+G    V    +Y D  G  + P  +L EMA++G  F+
Sbjct: 651 GIGFPPFLGGPFRYMDSLGAKHLVETLKRYQDQFGDRFAPCDRLVEMAESGSKFY 705