Pairwise Alignments

Query, 255 a.a., ABC transporter ATP-binding protein from Pseudomonas fluorescens SBW25

Subject, 255 a.a., branched-chain amino acid ABC transporter, ATP binding protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  228 bits (582), Expect = 7e-65
 Identities = 119/251 (47%), Positives = 163/251 (64%), Gaps = 5/251 (1%)

Query: 5   ILKVENLSMRFGGLLAVNGVALTVKEKQVVALIGPNGAGKTTVFNCLTGFYKPSGGSILL 64
           +L + NL+  FGGL+AVN V+  V E  +V LIGPNGAGKTTVFN +TG YKP  G I  
Sbjct: 3   LLSLRNLTKTFGGLVAVNSVSFDVDEGSIVGLIGPNGAGKTTVFNLITGNYKPDSGDIFF 62

Query: 65  DGQPIQGLAGHEIARKGVVRTFQNVRLFKDMTAVENLLIAQHRHLNTNFFAGLFKTPAFR 124
           DG+ I+GL  H I + G+ RTFQ +RLF++M+ +EN+L   H  +    F+ +  T   R
Sbjct: 63  DGRAIKGLLTHRIVQMGIARTFQTIRLFQNMSVMENVLAGCHCRMTAGVFSAMLGTAGHR 122

Query: 125 KSEREAMEYAEYWLDKVNLTEFANRPAGTLAYGQQRRLEIARCMMTRPRILMLDEPAAGL 184
           + E+ A+E A   L+ V L +  +  A  L+YG QR LEIAR + T PR ++LDEPA G+
Sbjct: 123 REEKRAIERAVRELEFVGLADQHDNLAKNLSYGNQRLLEIARALATDPRFIILDEPAGGM 182

Query: 185 NPKETEDLKALIGVLR--EENNATVLLIEHDMKLVMSISDHIVVINQGTPLADGTPEQIR 242
           N +ET    ALIG +R   +   +VLLIEHDM LVM + + +VV+  G  +A+GTP  I+
Sbjct: 183 NDQET---AALIGTIRAIRDRGISVLLIEHDMSLVMKVCEKLVVLEYGALIAEGTPSVIK 239

Query: 243 DNPEVIKAYLG 253
            +P VI+AYLG
Sbjct: 240 RDPRVIEAYLG 250