Pairwise Alignments

Query, 223 a.a., membrane protein from Pseudomonas fluorescens SBW25

Subject, 221 a.a., Predicted membrane protein from Pseudomonas stutzeri RCH2

 Score =  192 bits (489), Expect = 3e-54
 Identities = 96/225 (42%), Positives = 143/225 (63%), Gaps = 6/225 (2%)

Query: 1   MRAAHSLALFALLPLFAACQMF--DSEPAKPSLAGLTRMQGELTAVGGKLLFQPCNDKRN 58
           M A+  L    LLPL A CQ F  D  PA+P+     R+QGE+  + G+L  Q C  +R 
Sbjct: 1   MIASRLLLAVLLLPL-AGCQSFFADRSPAQPATE---RLQGEVRQIDGQLQLQSCQGQRL 56

Query: 59  YVVNDTSGTSVLQEAASLAGQQGALFADLRGQFSGVASGTQGSVDLQQLYRMERSTSACN 118
             + D +     +  A +   Q  LFADLRG  S    G +G + + ++YR++R    C+
Sbjct: 57  LTLLDANTGFEEEAQALMTHAQDRLFADLRGTLSQAKPGVEGQLSITRIYRLQREGHGCD 116

Query: 119 DPDFKRTILRANGHNPAWSMNVTAKGMVLQREGQPPLAVPYVEEQIGEGRFNLMTEANNQ 178
           + +FK+ ILRA+GH P W++ VT +GM+L R+G+ P+A+PY+EEQ+  G+ +  +EAN  
Sbjct: 117 EDNFKQLILRASGHEPGWTVTVTTRGMLLVRQGESPIALPYLEEQLPGGQLSFTSEANEH 176

Query: 179 KVELWVAPQRCVDPVSGSLQHMSAELRVNGQVQRGCAAFGGSRDD 223
           +++LWVAPQRCVD  SG++ H+S ELR++GQ  RGCA +GG R+D
Sbjct: 177 RLDLWVAPQRCVDSASGTVSHLSVELRLDGQTLRGCAYYGGGRND 221