Pairwise Alignments

Query, 236 a.a., ABC transporter permease from Pseudomonas fluorescens SBW25

Subject, 276 a.a., L-lysine ABC transporter, permease component 2 (from data) from Sinorhizobium meliloti 1021

 Score =  137 bits (345), Expect = 2e-37
 Identities = 81/221 (36%), Positives = 123/221 (55%), Gaps = 3/221 (1%)

Query: 9   WRPFLYS--DGQHITGLAMTMWLLTAALVIGFVVSIPLSIARVSRNPLVRWPVQFYTYLF 66
           W P  +S      ++GL +T+ L+ +++++G V+S+P+++ R+S+N L  W    Y Y F
Sbjct: 50  WDPEKFSRYGPSFLSGLGVTLTLVISSILMGAVLSLPVALGRMSKNRLWGWLAYAYVYFF 109

Query: 67  RGTPLYIQLLICYTGIYSIAAVRAQPVLDAFFRDAMNCTILTFALNTCAYTTEIFAGSIR 126
           RGTPL  QL + Y G+ S         L  FFRDA NC + TF LNT AY  EI  G+I 
Sbjct: 110 RGTPLITQLFLIYYGLGSFRPQLETVGLWWFFRDAWNCALFTFTLNTAAYQAEILRGAIE 169

Query: 127 SMAHGEVEAAKAYGLSGWKLYAYVIMPSALRRSLPYYSNEVILMLHSTTVAFTATIPDIL 186
           S+  G+ E A A GL     +  VI+P A+  +L  Y NE+ILM+  + +    T+ D++
Sbjct: 170 SVPRGQREGAAALGLPERVAFFKVILPQAMIVALRPYGNEIILMIKGSAIVAIVTVFDLM 229

Query: 187 KVARDANSATFMTFQSFGIAALIYLTVTFALVGLFRLAERR 227
              R A S TF  +Q +  AA++YL +   L  ++   E R
Sbjct: 230 GETRRAFSRTF-DYQMYIWAAILYLLMVELLRNIWGWLEAR 269