Pairwise Alignments

Query, 352 a.a., recombinase RecA from Pseudomonas fluorescens SBW25

Subject, 348 a.a., recombinase A from Marinobacter adhaerens HP15

 Score =  551 bits (1420), Expect = e-162
 Identities = 276/341 (80%), Positives = 308/341 (90%), Gaps = 1/341 (0%)

Query: 1   MDDNKKKALAAALGQIERQFGKGAVMRMGDHDRQAIPAISTGSLGLDIALGIGGLPKGRI 60
           M+DN+KKAL+AALGQIERQFGKGAVM+MGD  R+AIPA+STGSLGLD+ALGIGGLP GRI
Sbjct: 1   MEDNRKKALSAALGQIERQFGKGAVMKMGDQPREAIPAVSTGSLGLDVALGIGGLPYGRI 60

Query: 61  VEIYGPESSGKTTLTLSVIAQAQKMGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDT 120
            EIYGPESSGKTTLTL VIA+AQK G TCAFVDAEHALDP YA KLGVNVDDLLVSQPDT
Sbjct: 61  CEIYGPESSGKTTLTLQVIAEAQKAGKTCAFVDAEHALDPVYAEKLGVNVDDLLVSQPDT 120

Query: 121 GEQALEITDMLVRSNAIDVIVVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGN 180
           GEQALEI DMLVRSNA+DVI+VDSVAAL PKAEIEGEMGD HVGLQARLMSQALRK+TGN
Sbjct: 121 GEQALEIADMLVRSNAVDVIIVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTGN 180

Query: 181 IKNANCLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTGAVKEGDEVVGSE 240
           +K+ANCL+IFINQIRMKIGVMFGSPETTTGGNALKFY+SVRLDIRR GAVK+GDEVVG+E
Sbjct: 181 VKHANCLMIFINQIRMKIGVMFGSPETTTGGNALKFYSSVRLDIRRIGAVKDGDEVVGNE 240

Query: 241 TRVKVVKNKVAPPFRQAEFQILYGKGIYLNGEMIDLGVLHGFVEKSGAWYAYNGSKIGQG 300
           TRVKVVKNKV+PPF+QAEFQI+YGKGIY   E++D+GV  GFV+KSGAWYAYNG KIGQG
Sbjct: 241 TRVKVVKNKVSPPFKQAEFQIMYGKGIYHMAEVLDMGVKEGFVDKSGAWYAYNGDKIGQG 300

Query: 301 KANSAKFLADNPDIAATLEKQIRDKLLTAAPDVKAAANREP 341
           KAN+ KFL +N DIA  +E ++RDKL+   P+ +  A  EP
Sbjct: 301 KANACKFLEENMDIANEIEAKVRDKLM-PKPEPRKDAKEEP 340