Pairwise Alignments

Query, 352 a.a., recombinase RecA from Pseudomonas fluorescens SBW25

Subject, 357 a.a., recA protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  488 bits (1257), Expect = e-143
 Identities = 241/344 (70%), Positives = 290/344 (84%)

Query: 1   MDDNKKKALAAALGQIERQFGKGAVMRMGDHDRQAIPAISTGSLGLDIALGIGGLPKGRI 60
           +D NK+KALAA L QIE+QFGKG++M++G+     +  ISTGSL LD+ALG GGLP GRI
Sbjct: 3   VDPNKEKALAAVLSQIEKQFGKGSIMKLGEDRSMDVETISTGSLSLDVALGAGGLPMGRI 62

Query: 61  VEIYGPESSGKTTLTLSVIAQAQKMGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDT 120
           VEIYGPESSGKTTLTL VIA AQ+ G TCAF+DAEHALDP YA KLGV++D+LL SQPDT
Sbjct: 63  VEIYGPESSGKTTLTLEVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDT 122

Query: 121 GEQALEITDMLVRSNAIDVIVVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGN 180
           GEQALEI D L RS A+DVI+VDSVAAL PKAEIEGE+GD H+GL AR+MSQA+RK+ GN
Sbjct: 123 GEQALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182

Query: 181 IKNANCLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTGAVKEGDEVVGSE 240
           +K +N L+IFINQIRMKIGVMFG+PETTTGGNALKFYASVRLDIRRTGA+KEGDEVVG+E
Sbjct: 183 LKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKEGDEVVGNE 242

Query: 241 TRVKVVKNKVAPPFRQAEFQILYGKGIYLNGEMIDLGVLHGFVEKSGAWYAYNGSKIGQG 300
           TRVKVVKNKVA PF+QAEFQILYG+GI   GE++DLGV H  +EK+GAWY+Y G KIGQG
Sbjct: 243 TRVKVVKNKVAAPFKQAEFQILYGQGINRTGELVDLGVAHKLIEKAGAWYSYKGDKIGQG 302

Query: 301 KANSAKFLADNPDIAATLEKQIRDKLLTAAPDVKAAANREPVAE 344
           +AN+ K+L +NP IAA ++K +R+ LL+    + ++A+ +   E
Sbjct: 303 RANAGKYLTENPAIAAEIDKTLRELLLSNPSALASSASDDDNVE 346