Pairwise Alignments

Query, 352 a.a., recombinase RecA from Pseudomonas fluorescens SBW25

Subject, 357 a.a., recA protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  408 bits (1048), Expect = e-118
 Identities = 207/349 (59%), Positives = 264/349 (75%), Gaps = 3/349 (0%)

Query: 2   DDNKKKALAAALGQIERQFGKGAVMRMGDHDRQAIPAISTGSLGLDIALGIGGLPKGRIV 61
           ++ +++AL  AL  IER++G GAVM++ D    AIP I TGS+GLD+ALG+GG+P+GR+ 
Sbjct: 10  EEMRREALETALSTIERKYGLGAVMKLSDEAHVAIPVIPTGSIGLDLALGVGGVPRGRVT 69

Query: 62  EIYGPESSGKTTLTLSVIAQAQKMGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTG 121
           EIYGPESSGKTTLTL +IA+AQK G T AF+DAEHALD  YA +LGVN ++LL+SQPD G
Sbjct: 70  EIYGPESSGKTTLTLHIIAEAQKRGGTAAFIDAEHALDVAYARRLGVNTEELLISQPDFG 129

Query: 122 EQALEITDMLVRSNAIDVIVVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNI 181
           EQAL+I DMLVRS A+D++V+DSVAAL+P+AE+EG MGD  VG QARLMS ALRK+TG I
Sbjct: 130 EQALDIADMLVRSAAVDLVVIDSVAALIPQAELEGSMGDTQVGGQARLMSHALRKLTGTI 189

Query: 182 KNANCLVIFINQIRMKIGVM-FGSPETTTGGNALKFYASVRLDIRRTGAVKEGDEVVGSE 240
             +   VIFINQIRMKIG M +GSPETTTGGNALKFY+SVR+DIR+   +K+ +EV GS 
Sbjct: 190 HKSRTAVIFINQIRMKIGTMGYGSPETTTGGNALKFYSSVRMDIRKIQTLKDKEEVYGSR 249

Query: 241 TRVKVVKNKVAPPFRQAEFQILYGKGIYLNGEMIDLGVLHGFVEKSGAWYAYNGSKIGQG 300
           TRVK+VKNKVAPPFR+A F ILYG GI   GE+IDLG   G ++KSG+W+A+   ++GQG
Sbjct: 250 TRVKIVKNKVAPPFREALFDILYGTGISRTGEIIDLGSDAGIIDKSGSWFAFGSERLGQG 309

Query: 301 KANSAKFLADNPDIAATLEKQIRDKLLTAAPDVKAAANREPVAEVEEAD 349
           K N    L +N  +   +E ++ + L       K A++ E  A  EE D
Sbjct: 310 KENVRALLEENAPLREAIEAKLIEHL--GMTPTKFASSGEEPANDEEND 356