Pairwise Alignments

Query, 403 a.a., cytochrome bc complex cytochrome b subunit from Pseudomonas fluorescens SBW25

Subject, 404 a.a., cytochrome b/b6 domain-containing protein (RefSeq) from Shewanella loihica PV-4

 Score =  620 bits (1599), Expect = 0.0
 Identities = 287/402 (71%), Positives = 343/402 (85%)

Query: 1   MSKFMDWVDARFPATKMWEDHLSKYYAPKNFNFFYFFGSLALLVLVNQIVTGVWLTMSYT 60
           +   +DW+DAR P T  +  H+ +Y  P NFNF+YFFGSLA+LVLVNQ++TG+WLTM+Y 
Sbjct: 2   VKNIIDWIDARIPMTATYNRHVGQYATPTNFNFWYFFGSLAMLVLVNQLLTGIWLTMNYV 61

Query: 61  PSAEEAFASVEYIMRDVEYGSILRLLHSTGASAFFIVVYLHMFRGLLYGSYQKPRELVWV 120
           P+AE AFAS+EYIMRDVEYG +LR +HSTGASAFF+VVYLHMFRGL+YGSYQKPREL+W+
Sbjct: 62  PTAEGAFASIEYIMRDVEYGWLLRYMHSTGASAFFVVVYLHMFRGLIYGSYQKPRELLWL 121

Query: 121 FGMLIYLALMAEAFMGYLLPWGQMSYWGAQVIISLFGAIPVIGNDLTQWIRGDYLISGIT 180
           FGMLI+L LMAEAFMGYLLPWGQMSYWGAQVIISLFGAIPVIG+DLT WIRGD+++SG T
Sbjct: 122 FGMLIFLVLMAEAFMGYLLPWGQMSYWGAQVIISLFGAIPVIGDDLTLWIRGDFVVSGAT 181

Query: 181 LNRFFALHVVALPIVILGLVVLHILALHEVGSNNPDGVDIKKHKDENGIPLDGIPFHPYY 240
           LNRFFALHV+ALP+V++ LV LH++ALHEVGSNNPDG++IKK+KDENG P DGIPFHPYY
Sbjct: 182 LNRFFALHVIALPLVLVVLVFLHLIALHEVGSNNPDGIEIKKNKDENGWPKDGIPFHPYY 241

Query: 241 TVKDIVGVVVFLFVFCSIVFFFPEMGGYFLEKPNFEQANAFKTPEHIAPVWYFTPFYAIL 300
           TVKDI+GV  FL VFC ++FF PE GGYFLEKPNFE AN  KTPEHIAPVWYFTPFYAIL
Sbjct: 242 TVKDIMGVAGFLIVFCYVLFFMPEGGGYFLEKPNFEAANPMKTPEHIAPVWYFTPFYAIL 301

Query: 301 RAIPDKLMGVIAMGAAIAVLFVLPWLDRSPVKSMRYKGWLSKIWLWVFCIAFVILGVLGV 360
           RAIPDKL+GV+ MG AIAVLFVLPWLDR  VKS+RY+  + K+ +  F ++FVILG LG 
Sbjct: 302 RAIPDKLLGVVGMGLAIAVLFVLPWLDRCKVKSIRYRSMIHKLNIGQFAVSFVILGYLGA 361

Query: 361 LAPTPERTLLSQVCTFLYFAYFILMPFYTRLEKTKPVPERVT 402
           +  TP  T+ ++V T  YF +F+ +  Y++ EKTKPVPER+T
Sbjct: 362 VPATPTLTIAARVFTLTYFGFFLALWLYSKNEKTKPVPERLT 403