Pairwise Alignments

Query, 403 a.a., cytochrome bc complex cytochrome b subunit from Pseudomonas fluorescens SBW25

Subject, 404 a.a., ubiquinol-cytochrome c reductase, cytochrome b (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  618 bits (1593), Expect = 0.0
 Identities = 286/402 (71%), Positives = 344/402 (85%)

Query: 1   MSKFMDWVDARFPATKMWEDHLSKYYAPKNFNFFYFFGSLALLVLVNQIVTGVWLTMSYT 60
           +   ++W+DAR P T  +  H+ +Y  P NFNF+YFFGSLA+LVLVNQ++TG+WLTM+Y 
Sbjct: 2   VKNLINWIDARIPMTATYNRHVGQYATPTNFNFWYFFGSLAMLVLVNQLLTGIWLTMNYV 61

Query: 61  PSAEEAFASVEYIMRDVEYGSILRLLHSTGASAFFIVVYLHMFRGLLYGSYQKPRELVWV 120
           P+AE AFASVEYIMRDVEYG +LR +HSTGASAFF+V+YLHMFRGL+YGSYQKPREL+W+
Sbjct: 62  PTAEGAFASVEYIMRDVEYGWLLRYMHSTGASAFFVVIYLHMFRGLIYGSYQKPRELLWL 121

Query: 121 FGMLIYLALMAEAFMGYLLPWGQMSYWGAQVIISLFGAIPVIGNDLTQWIRGDYLISGIT 180
           FGMLI+L LMAEAFMGYLLPWGQMSYWGAQVIISLFGAIPVIG+DLT WIRGDY+ISG T
Sbjct: 122 FGMLIFLVLMAEAFMGYLLPWGQMSYWGAQVIISLFGAIPVIGDDLTLWIRGDYVISGAT 181

Query: 181 LNRFFALHVVALPIVILGLVVLHILALHEVGSNNPDGVDIKKHKDENGIPLDGIPFHPYY 240
           LNRFFALHV+ALP+V++ LV LH++ALHEVGSNNPDG++IKK+KDENG P+DGIPFHPYY
Sbjct: 182 LNRFFALHVIALPLVLVVLVFLHLIALHEVGSNNPDGIEIKKNKDENGWPVDGIPFHPYY 241

Query: 241 TVKDIVGVVVFLFVFCSIVFFFPEMGGYFLEKPNFEQANAFKTPEHIAPVWYFTPFYAIL 300
           TVKDI+GV  FL VFC ++FF PE GGYFLEKPNFE AN  KTPEHIAPVWYFTPFYAIL
Sbjct: 242 TVKDIMGVAGFLIVFCYVLFFIPEGGGYFLEKPNFEAANPMKTPEHIAPVWYFTPFYAIL 301

Query: 301 RAIPDKLMGVIAMGAAIAVLFVLPWLDRSPVKSMRYKGWLSKIWLWVFCIAFVILGVLGV 360
           RA+PDKL GVI MG +I VLFVLPWLDR  VKS+RY+  L K+ +  F ++F++LG LGV
Sbjct: 302 RAVPDKLGGVIMMGLSIGVLFVLPWLDRCKVKSVRYRSTLHKLNIAQFAVSFIVLGYLGV 361

Query: 361 LAPTPERTLLSQVCTFLYFAYFILMPFYTRLEKTKPVPERVT 402
           +  +P  T+++QV TF YF +F+ +  Y++ EKTKPVP R+T
Sbjct: 362 VPASPTLTIVAQVFTFTYFGFFVALWVYSKNEKTKPVPARLT 403