Pairwise Alignments

Query, 403 a.a., cytochrome bc complex cytochrome b subunit from Pseudomonas fluorescens SBW25

Subject, 449 a.a., Cytochrome b/b6 domain (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  346 bits (888), Expect = e-100
 Identities = 181/414 (43%), Positives = 250/414 (60%), Gaps = 26/414 (6%)

Query: 7   WVDARFPATKMWEDHLSKYYAPKNFNFFYFFGSLALLVLVNQIVTGVWLTMSYTPSAEEA 66
           W+ +R P   +  D +     PKN N+ + +G + +  L+ QIVTG+ L M Y P  + A
Sbjct: 18  WIHSRLPIVGLIYDTIM-IPTPKNLNWMWIWGIVLMFCLILQIVTGIVLVMHYVPHVDMA 76

Query: 67  FASVEYIMRDVEYGSILRLLHSTGASAFFIVVYLHMFRGLLYGSYQKPRELVWVFGMLIY 126
           FASVE+IMR+V  G +LR LH  GAS FF+ VYLH+FR L YGSY+ PRE+ W+ GMLIY
Sbjct: 77  FASVEHIMRNVNGGHMLRYLHMNGASLFFVAVYLHIFRNLYYGSYKAPREITWIIGMLIY 136

Query: 127 LALMAEAFMGYLLPWGQMSYWGAQVIISLFGAIPVIGNDLTQWIRGDYLISGITLNRFFA 186
           L +MA AFMGY+LPWGQMS+WGA VI  LFGAIP +G+ L  W+ G   +   TL RFF+
Sbjct: 137 LLMMATAFMGYVLPWGQMSFWGATVITGLFGAIPFVGDALQTWLLGGPAVDNATLTRFFS 196

Query: 187 LHVVALPIVILGLVVLHILALHEVGSNNPDGVDIKKHKDENGIPLDGIPFHPYYTVKDIV 246
           LH + LP VILGL ++H+ A H  G+NNP GV++++   E     D +PF PY+ +KD+ 
Sbjct: 197 LHYL-LPFVILGLSIVHVWAFHTTGNNNPTGVEVRRTSKEEA-ERDTLPFWPYFVIKDLF 254

Query: 247 GVVVFLFVFCSIVFFFPEMGGYFLEKPNFEQANAFKTPEHIAPVWYFTPFYAILRAI-PD 305
            + V + VF ++V F P    Y     N+ +AN   TP HI P WYF PFYAILRA  PD
Sbjct: 255 ALAVIMVVFFAVVGFMP---NYLGHPDNYIEANPLVTPSHIVPEWYFLPFYAILRAFTPD 311

Query: 306 -----------------KLMGVIAMGAAIAVLFVLPWLDRSPVKSMRYKGWLSKIWLWVF 348
                               GV+AM  AIAV+ + PWLD S V+S RY+  + K W W+F
Sbjct: 312 VWVVMFASWITGGIIDAAFFGVLAMFGAIAVMALAPWLDTSSVRSGRYRP-MFKWWFWLF 370

Query: 349 CIAFVILGVLGVLAPTPERTLLSQVCTFLYFAYF-ILMPFYTRLEKTKPVPERV 401
            + FV+L  +G +       +++ + +  +FAYF +++P    +EK    P  +
Sbjct: 371 IVNFVVLTWVGAMPAEGIYPIIALIGSAYWFAYFLVILPLLGVIEKPTAPPATI 424