Pairwise Alignments

Query, 377 a.a., branched-chain amino acid ABC transporter substrate-binding protein from Pseudomonas fluorescens SBW25

Subject, 372 a.a., ABC-type branched-chain amino acid transport systems, periplasmic component from Pseudomonas stutzeri RCH2

 Score =  289 bits (740), Expect = 8e-83
 Identities = 161/366 (43%), Positives = 228/366 (62%), Gaps = 13/366 (3%)

Query: 8   KGFLALAVAAALGVSTFVQADVKIGVAGPMTGANAAFGEQYMKGAQAAADVINKAGGING 67
           K FLA+A+  A    T     ++IG+AGP+TG  A +G+    GA+ A + INKAGG+NG
Sbjct: 9   KIFLAMALTGAASY-TLAADTIRIGLAGPVTGPVAQYGDMQFIGAEMAIEQINKAGGVNG 67

Query: 68  EKIVLVAGDDACEPKQAVAVANRLADQDKVIGVVGHFCSSNTIPASEVYDEAGIIAITPG 127
            ++  V  DDAC+PKQAVAVAN++ + D V  VVGH CSS+T PAS++Y++ GI+ IT  
Sbjct: 68  AQLKGVRYDDACDPKQAVAVANKIVN-DNVKFVVGHLCSSSTQPASDIYEDEGILMITAA 126

Query: 128 STNPQVTERGLGAMFRMCGRDDQQGIVAGDYIVDVLKGKKVAVINDKDTYGKGLADATAA 187
           ST+P +T RG   +FR  G D  QG  AG++I D +K K VAVI+DK  YG+G+A A   
Sbjct: 127 STSPDITSRGYELIFRTIGLDSLQGPTAGNFIADHVKPKNVAVIHDKQQYGEGIATAVKQ 186

Query: 188 QLTKRGVKPVLEEGLTRGEKDFSALVTKIRSIGADVVYFGGLHPEAGPLVRQIREAGLKA 247
            L  + +K  L EG+  G+KDFS+L+ K++  G D VY+GG HPE G L+RQ +E GL  
Sbjct: 187 TLEGKNIKVGLFEGINAGDKDFSSLIAKLKREGVDFVYYGGYHPELGLLLRQSKEKGLNV 246

Query: 248 AFMSDDGVVTDELAKTAGGNQYVDGVYMT----FGADPRLLPDSKAVVDDFRKAGYEPEG 303
            FM  +GV   E++  AG     +G+Y+T    F  DPR    +K +VD F+    +P G
Sbjct: 247 RFMGPEGVGNSEISAIAGPAS--EGMYVTLPKSFDQDPR----NKELVDGFKAKKQDPSG 300

Query: 304 -YTLYAYASVQALAAGFNGAKSNKGEDAAKWLKAHPVKTVMGEKTWDAKGDLKVSDYVVY 362
            +   AYA+VQ +A G   A S   +  A+ L+++   T  G  ++D KGDLK  ++VVY
Sbjct: 301 PFVFPAYAAVQVIAEGIEKAGSTDTDKVAEALRSNTFDTPTGMLSFDEKGDLKDFNFVVY 360

Query: 363 QWDKDG 368
           +W +DG
Sbjct: 361 EWHQDG 366