Pairwise Alignments

Query, 377 a.a., branched-chain amino acid ABC transporter substrate-binding protein from Pseudomonas fluorescens SBW25

Subject, 370 a.a., Extracellular ligand-binding receptor (NCBI) from Rhodospirillum rubrum S1H

 Score =  247 bits (630), Expect = 4e-70
 Identities = 139/350 (39%), Positives = 195/350 (55%), Gaps = 5/350 (1%)

Query: 17  AALGVSTF-VQADVKIGVAGPMTGANAAFGEQYMKGAQAAADVINKAGGINGEKIVLVAG 75
           +AL +S     AD+ +G+A  +TG  AA GEQ  +GA+AA    NKAGG+ GE I L   
Sbjct: 14  SALAISPLPALADIPVGLALGLTGQIAAIGEQSRRGAEAAIAAFNKAGGLKGETITLQVE 73

Query: 76  DDACEPKQAVAVANRLADQDKVIGVVGHFCSSNTIPASEVYDEAGIIAITPGSTNPQVTE 135
           DDAC+PKQ VAVAN+      V  V+GH C+  T+ AS VY E  I  +T  +T P +TE
Sbjct: 74  DDACDPKQGVAVANKFVSAG-VEAVIGHMCTGPTMAASTVYSEEEIPMVTASATGPDLTE 132

Query: 136 RGLGAMFRMCGRDDQQGIVAGDYIVDVLKGKKVAVINDKDTYGKGLADATAAQLTKRGVK 195
           RGL  +FR  GRDDQQG +AG  I +    +  A+++DK  YG+GLA+     +   G +
Sbjct: 133 RGLTNVFRATGRDDQQGTIAGKMIAERFADQTTAIVHDKQAYGRGLAEEAKKAMNAAGKE 192

Query: 196 PVLEEGLTRGEKDFSALVTKIRSIGADVVYFGGLHPEAGPLVRQIREAGLKAAFMSDDGV 255
             L   +  GE+DFSAL+++++  G  VVY+GG + + G +VRQ R  GL A F+  DG+
Sbjct: 193 EALFAAIVPGEQDFSALISRLKQAGVKVVYYGGYYNDLGQIVRQSRAQGLDAVFVGGDGL 252

Query: 256 VTDELAKTAGGNQYVDGVYMTFGADPRLLPDSKAVVDDFRKAGY-EPEGYTLYAYASVQA 314
            + E     G  +  +G   TF  D    P +K  V+ F+  G  + + +  Y YA+ Q 
Sbjct: 253 SSSEFWAITG--EAGEGTLFTFTPDASTNPAAKEAVEAFKADGKGDADNFAYYYYAAAQV 310

Query: 315 LAAGFNGAKSNKGEDAAKWLKAHPVKTVMGEKTWDAKGDLKVSDYVVYQW 364
           L      A S   E   K L+ +  +TV G   +DAKGDL    +V YQW
Sbjct: 311 LTQAMAKAGSADPEAVTKALRDNTFETVAGPMDFDAKGDLTAPAFVFYQW 360