Pairwise Alignments

Query, 204 a.a., trimeric intracellular cation channel family protein from Pseudomonas fluorescens SBW25

Subject, 206 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score =  149 bits (376), Expect = 3e-41
 Identities = 77/185 (41%), Positives = 113/185 (61%), Gaps = 1/185 (0%)

Query: 14  AMTGALSAGRRGMDWFGVVLIACVTALGGGSVRDVLLGHYPLTWVKHPEYL-VLTSVAAL 72
           A++GAL+AGR  MD FGV+++A VTA+GGGS+RD LLG  P+ W++ P Y+ V+ +   L
Sbjct: 17  ALSGALAAGRHRMDPFGVIVLASVTAIGGGSIRDALLGTTPVFWIRDPNYIIVILATVLL 76

Query: 73  VTIFIAPLMRHLRSLFLALDAVGLVAFTLIGCMTALEMGHGMLVASVSGVITGVFGGILR 132
             +FI    +  +      DA GL  FT+IG   AL +G   ++A V G+ITGV GGI+R
Sbjct: 77  ALLFIRKPKKVPQYTLPVADAFGLALFTVIGAEKALNLGLSGMIAVVMGLITGVGGGIIR 136

Query: 133 DIFCNDIPLIFRRELYASVSFLAAWFYLLCLYLELPSEQAILLTLFSGFLLRLLAIRFHW 192
           DI C  IP+I R E+YA+ S      Y   +   L  + A+ + + S  ++RL AI++H 
Sbjct: 137 DILCRQIPMILRTEIYATASIFGGISYTCAITWGLADKVALAIAMISALVIRLAAIKWHL 196

Query: 193 EMPKF 197
            +P F
Sbjct: 197 RLPAF 201