Pairwise Alignments

Query, 244 a.a., LPS biosynthesis protein from Pseudomonas fluorescens SBW25

Subject, 251 a.a., 3-deoxy-D-manno-octulosonic acid kinase from Vibrio cholerae E7946 ATCC 55056

 Score = 50.4 bits (119), Expect = 3e-11
 Identities = 33/123 (26%), Positives = 57/123 (46%), Gaps = 13/123 (10%)

Query: 67  KPRVKSEWQNLKRFAKWGIPTADVVAWGLERKGLAYERGAMITRELPKTEDLSVLAERND 126
           K R   E+  L      G+     +A  +++ GL Y +  +++ ++P   DL  +     
Sbjct: 100 KTRSYQEFMLLNHLRDAGVNVPRPIAARVQKHGLLY-KADLLSEKVPNARDLVSI----- 153

Query: 127 ARLRDPKWVDAVSRQLAEYTRTMHDHRFTHNDLKWRNLLIDDQSTLYLIDCPN-----GD 181
             L++    D + R++    R MHD +  H DL   N+LIDDQ  +++ID        GD
Sbjct: 154 --LQESPISDELYRKIGREIRKMHDAQVNHTDLNIHNILIDDQEKVWIIDFDKCYVQIGD 211

Query: 182 FWR 184
            W+
Sbjct: 212 SWK 214