Pairwise Alignments

Query, 739 a.a., primosomal protein N' from Pseudomonas fluorescens SBW25

Subject, 811 a.a., Primosomal protein n (NCBI) from Rhodospirillum rubrum S1H

 Score =  456 bits (1172), Expect = e-132
 Identities = 308/813 (37%), Positives = 414/813 (50%), Gaps = 105/813 (12%)

Query: 3   DAILRLALPSPLRRLFDYRAPAGVLRAQLQPGMRVRVPFGRREMIGILVEIADHSEVPAE 62
           + ++ + LP PL   +DY+ PAG+ R  +  G  VRVP GRRE IG+ V  A   E P E
Sbjct: 22  EPVVAVLLPLPLAGAYDYKVPAGMARPAV--GTLVRVPLGRREEIGV-VWGAGAGETPPE 78

Query: 63  KLKPALAILDATPPLPPALFKLCLWTAQYYQHSLGDTLSWAL--PVLLRQ---------- 110
           +LKP +   +  PPLP  L     W A Y     G  L  AL  P  L            
Sbjct: 79  RLKPLIGFPEC-PPLPAPLRAFIDWVAAYTVQPPGAVLRMALSVPAALEAPPPALGWRRP 137

Query: 111 --GELAEARQERFWSMVPG-ARLDDPRIARAPRQREALATLAQHPH--GVAHQLLSKLML 165
             G+ A  ++      +PG ARL       +P ++  LA L  HP        L  +  +
Sbjct: 138 SAGQRAAGQRAEGQGPLPGGARL-------SPGRQRVLAVLDDHPGLPFAGADLAREAAV 190

Query: 166 SKDSLDLLLAKGMVQVEIRKH-----APDARHEHWLAQPELPLNPEQRAAYEAIRAGFDS 220
               +  +   G+++   R +     APDA       +P   L+ +Q+AA + +R   D 
Sbjct: 191 GPAVVAAMAKAGLLEAVTRSNEWSPQAPDAD------RPGPLLSADQQAAADGLRTALDQ 244

Query: 221 -FHAFLLAGVTGSGKTEVYLQLIRETLQAGKQALVLIPEINLGPQTLARFEQRFNARIAL 279
            F   LL GVTGSGKTEVY + I ETL+ G+QALVL+PEI L  Q   RF  RF A    
Sbjct: 245 GFSGLLLEGVTGSGKTEVYFEAIAETLRRGRQALVLLPEIALAAQWPRRFADRFGAAPVQ 304

Query: 280 VHSAVNDRERLESWLAARDGDADIIIGTRSALFTPMKNPGLIIIDEEHDGSYKQQEGLRY 339
            HS +    R  +W A   G A +++G RSALF P  + GLII+DEEHD ++KQ+EG+ Y
Sbjct: 305 WHSQMGAAARRRAWRAVALGRAPVVVGARSALFLPYPDLGLIIVDEEHDSAFKQEEGVPY 364

Query: 340 HARDLALVRARQEDIPIVLGSATPSLESLHNAYTGRYGLLRLNERAGGAKQPRFLRLDVK 399
           +ARD+A+VRAR    P VL SATPSLE++ NA  GRY  L L  R GGA+ P    LD++
Sbjct: 365 NARDMAVVRARLGGFPAVLASATPSLETIENARQGRYRHLVLPRRHGGAEMPEITLLDLR 424

Query: 400 SRP----LDSGISGP--------------------------------------------- 410
             P    L +  +GP                                             
Sbjct: 425 RAPPQKWLPTDFAGPGGSEGLAAPGGANDEAEEQKAPPPSPTASPSPTASPSPMARPARL 484

Query: 411 ------MQQAIGQTLAAGQQVLVFLNRRGFAPTLLCHDCGWMSECERCDARMTVHQRHGE 464
                 +  A+ +TLAAG+QVL+FLNRRG+AP  LC  CG   +C RC A +  H+R G 
Sbjct: 485 GWLSPPLITAVEETLAAGEQVLLFLNRRGYAPLTLCRSCGHRLKCPRCTAWLVEHRRDGR 544

Query: 465 LRCHHCGHVERVPRHCPQCGKVD-LRPVGAGTERAEERLGILFPDYPVLRVDRDSTSRKD 523
           LRCHHCG+ + +P  CP CG  D L P G G ER  E     FP   +     D+ +   
Sbjct: 545 LRCHHCGYQQPIPETCPACGVADSLAPCGPGVERLAEEAAHRFPKARMDVAASDTVTGPK 604

Query: 524 AMNQLFATIQKGQPCILIGTQMLAKGHHFPRVTLVSILDADGGLFSGDFRASERMAQLIV 583
               L   I      ++IGTQ++AKGHHFP +TLV ++D D GL  GD RASER  QL+ 
Sbjct: 605 EAAALATRIANHDIDLIIGTQIMAKGHHFPLITLVGVVDGDLGLTGGDLRASERTHQLLH 664

Query: 584 QVAGRAGRAEEPGRVIIQTHLADHPLLIQLTEQGYFAFAEQALSERRAAGLPPFSHLALL 643
           QVAGRAGRAE PGRV+IQT    HP++  L       F E   +ER+A  +PPF  L  L
Sbjct: 665 QVAGRAGRAERPGRVLIQTVDPGHPVMEALASGDPALFLEVEAAERQALAMPPFGRLVAL 724

Query: 644 RAEAHKPGQAESFLDEACSAAERLLGELGLSGIELLGPVPAPMERRAGRYRAQLLLQATS 703
                     +S   +A +AA      +G  G+++LGPVPAP+    GR+R +LLL+A  
Sbjct: 725 VISGE-----DSARVQAVAAALGRAAPMG-PGLDVLGPVPAPLAMLRGRHRHRLLLKAAR 778

Query: 704 RAPLHRLLSSWLLALEQMPSGRQVRWSLDVDPV 736
              +  ++  W L+L  +P G  V+  +DVDP+
Sbjct: 779 GVKVQPVVRHW-LSLVSIPPG--VKVQVDVDPI 808