Pairwise Alignments

Query, 695 a.a., TonB-dependent siderophore receptor from Pseudomonas fluorescens SBW25

Subject, 715 a.a., TonB-dependent receptor (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  218 bits (555), Expect = 8e-61
 Identities = 190/683 (27%), Positives = 314/683 (45%), Gaps = 57/683 (8%)

Query: 50  ATRTATPVRYVPQAIDSVKTESLRSYGTN---DLGQALSGIPNVSSGADTRFDSLRIRGF 106
           A R   P   +PQAI  +  + ++  G     DL    + +   ++G    +DS  +RGF
Sbjct: 53  AYRGNVPATELPQAISVLDEQLIKDSGLTRFQDLLDYSASVARQNNGGGL-WDSFSLRGF 111

Query: 107 DASND----FYLDGIRDDSQYV--RDLHNIERIEVLKGPAAVLYGRGGQGGIVNRVSKLP 160
             + +    + ++G      +   RDL N+  +E+LKGP + LYGR   GG VN V+K P
Sbjct: 112 PGNENMPSGYLINGFNGGRGFSGHRDLSNVAYVEILKGPGSALYGRSEPGGTVNIVTKKP 171

Query: 161 TAGHTSSIEAQGGSNDLRSVYADLSTDPTDTISLRLNMGNQDNNSFRDGVSGNRQLFAPS 220
               +  ++A  GS D   +  D+++  TDT++ R+N   Q+++SFRD V  ++++  PS
Sbjct: 172 QYQTSGYLKASKGSFDQYRLEGDVTSGITDTLAFRINGAWQEHDSFRDYVFSDKKIVTPS 231

Query: 221 MSWQLTPDLNWLVQYEYSRYNRTPDRGIPGVNGRPADVSRSTTYGDSRD---YIDDKTQS 277
           + WQL+ + + L + EY +  +  DRGI  +N     V RS   G+  D    +D     
Sbjct: 232 LRWQLSDESSLLYEVEYLKQEQLFDRGIVVLNNNFNTVPRSRYLGEPNDGATTVDATGHQ 291

Query: 278 LRSKLAYELNDNWQLR-------QTLGVFKLDSDFDNTYLTGYTPATNSVTRQRWQQDLT 330
           L  +  YEL+D+W L         +L  +  D++      + Y     ++TRQ   +D  
Sbjct: 292 LTYE--YELSDDWSLTAGYNYRDSSLNGYSSDAELAKGRQSLYDDG-RTLTRQHRYRDYA 348

Query: 331 TLNIFNNVELEGGFSTFGLEHRLLTGLELGSQRRDPKLYTATTVAQGGRVVPPLDLNQPN 390
           + +     EL G F T GL H LL G +    R    LY      +G +    +D+  P 
Sbjct: 349 SEDHSVRAELSGQFDTGGLRHNLLLGADAYHYRLKTGLYR----YRGPKGAYAIDIFAPQ 404

Query: 391 RNLSHTGRMSVSSDNHTEVESRALYVQDQLRLNDQWQILAGLRYDRFEVDTKNKLLNTRQ 450
              +    +S+  +N     +   Y+QDQL L   W++  GLR+DR+  +   ++ ++  
Sbjct: 405 YGAAQPD-VSLLYENRETQNAWGAYLQDQLDLTGHWKLHLGLRFDRYRQEIAEQVKSSLS 463

Query: 451 DVKSHSTSPRFGLVWTPLEHHSFYASWSKTFSPAGGGLIGITPNAAGSVNDLSPELTKQK 510
           D      SP+ GLV+   E  SFY S+S+ F P  G       + AG  N   PE ++  
Sbjct: 464 DQTDQRVSPKVGLVYQWSEALSFYGSYSEGFLPLSG------TDYAG--NPFEPEESQSV 515

Query: 511 EIGVKSDWLDD---RLSTTLAVYELELYNRRTSDPLNRTITLLSGLQRSRGVELTATGKL 567
           E+G+K +        ++ +LA ++ +  N  TSDP+N   +   G  +S G+EL    +L
Sbjct: 516 ELGIKFNSTGFGVLPINGSLAWFDAQKSNILTSDPVNVGFSATLGEAKSTGLELDLAAEL 575

Query: 568 VGNWYVRGGVGLQDAKVEKDNNGFE-------GKRVSDVAKRNASLFITWKPEMGWYAET 620
             N   +      + +   D+   +       G  + +V K   SL +  K ++  ++  
Sbjct: 576 TENLEAKLSYAYLNTRTANDSLNLDWGVLIPAGSPLVNVPKHTGSLVL--KQDLNDFSID 633

Query: 621 GLTLVGDRYADSL------NTVVLPGYGRWDALAGFRQKEWDVRAALN--NIADKTYYAS 672
           G   V  RY DS        +  LP Y         R  E  V  ALN  N+ D+ Y AS
Sbjct: 634 GHLGVTWRYVDSRLGDSADPSFQLPSYQLLGVFFATRLGE-SVSLALNVDNLLDEHYIAS 692

Query: 673 ATSVAQIQPGDPRSLVVTGTYSF 695
           + S     PG+PR++ V+ +Y F
Sbjct: 693 SYSALWPVPGEPRNVKVSVSYEF 715