Pairwise Alignments

Query, 925 a.a., DNA polymerase I from Pseudomonas fluorescens SBW25

Subject, 914 a.a., DNA polymerase I from Pseudomonas stutzeri RCH2

 Score = 1299 bits (3361), Expect = 0.0
 Identities = 670/925 (72%), Positives = 760/925 (82%), Gaps = 11/925 (1%)

Query: 1   MSQAPLVLVDGSSYLYRAFHALPPLTTSKGLPTGAVKGVLNMLKSLRKQYPDSPFAVVFD 60
           MSQAPL+LVDGSSYLYRAFHALPPLTTS G PTGAVKGVLNML SLR+QYPDSPFAVVFD
Sbjct: 1   MSQAPLILVDGSSYLYRAFHALPPLTTSTGKPTGAVKGVLNMLLSLRRQYPDSPFAVVFD 60

Query: 61  AKGGTFRDDMYAEYKANRPSMPDDMRLQIEPLHQSVIALGFPLLCVEGVEADDVIGTLAR 120
           AKG TFRD ++  YK++RP MPDD+R Q+EPLH SV ALG PLLCVEGVEADDVIGTLAR
Sbjct: 61  AKGPTFRDALFENYKSHRPPMPDDLRSQVEPLHASVRALGMPLLCVEGVEADDVIGTLAR 120

Query: 121 SSAAADRPVVISTGDKDMAQLVDGHITLVNTMTGSAMDIEGVKEKFGVAPEQIIDYLALM 180
             AA  R VVISTGDKDMAQLV  H+TLVNTMTGS  DIEGVK KFGV PE IID+LALM
Sbjct: 121 QCAALGRDVVISTGDKDMAQLVCPHVTLVNTMTGSVYDIEGVKTKFGVGPELIIDFLALM 180

Query: 181 GDSSDNIPGVPGIGPKTASGLLVGVNGGLKELYEQLDIVPTLPIRGAKTLPAKLEEHKEM 240
           GD  DNIPGVPG+G KTA GLL G+ GGLK LY+ LD V  LPIRGAK+L AKL EH++ 
Sbjct: 181 GDKVDNIPGVPGVGEKTACGLLNGIPGGLKGLYDNLDQVAGLPIRGAKSLGAKLAEHRDA 240

Query: 241 AFLSYQLATIKIDVPLDVGLDDLHLIEPDREKLLELYTLLEFKSWFDEIQRDAKRVELKA 300
           AF+SY+LATIKIDVPLDV + DL   EP RE L+ LY  LEFK+W D++ R+AK      
Sbjct: 241 AFMSYELATIKIDVPLDVEVGDLMPGEPHREALIALYRELEFKNWLDDLLREAKAAGENC 300

Query: 301 APVVEDVAEVAAPAEATYTTILDQATFDIWLKKLNDAKLFAFDTETTGIDAQQAQLVGVS 360
               E  +     AEA Y T+L+QA F+ WL +L  A+ FAFDTETT IDAQ+A+LVGVS
Sbjct: 301 EVQPEGCS---IQAEAQYETLLEQADFERWLDRLKTAECFAFDTETTSIDAQRAELVGVS 357

Query: 361 FAVQPHEAAYIPLTHAYIGAPEQLDRDTVLLALKPLLEDPTKLKVGQHAKFDMNILANCA 420
           FA++P +AAY+PL H+Y+G P+QL+ D VL ALKPLLEDP K K+ QH K+DMN+L +  
Sbjct: 358 FAIEPGQAAYVPLRHSYMGVPQQLELDAVLAALKPLLEDPAKTKICQHGKYDMNVLMH-- 415

Query: 421 IGGDPAHGITVRGIAFDTMLESYVLNATATRHDMDSLAKKYLDYDTVAFQDIAGKGAKQL 480
                 +GI +RG+ FDTMLESYVL+ATATRHDMDSLA KYL   T+ F+DIAGKGAKQL
Sbjct: 416 ------YGIEMRGMTFDTMLESYVLDATATRHDMDSLALKYLGRGTIRFEDIAGKGAKQL 469

Query: 481 TFDQIALEQAGPYAAEDADVTLRLHQALFAQLSAIPSLASVLTDIEIPLVPVLARIERQG 540
           TFDQIA+EQAGPYAAEDADVTLRLHQ L  +L   PSL  VLT+IE+PLVPVLARIER G
Sbjct: 470 TFDQIAIEQAGPYAAEDADVTLRLHQTLLGKLEQTPSLLKVLTEIEMPLVPVLARIERNG 529

Query: 541 ALVDKDLLGIQSIELGNKMVELERQAFEIAGEEFNLGSPKQLGAILYEKLGLPVLKKTGK 600
           ALVD  LLG QS+ELG+K+V+LER+AFEIAGEEFNLGSPKQL AILY+KLG PV+ KT  
Sbjct: 530 ALVDAQLLGQQSVELGDKLVQLEREAFEIAGEEFNLGSPKQLCAILYDKLGCPVISKTAG 589

Query: 601 GQASTAEEVLAKLAEDDYPLPKVLMQYRSMSKLKSTYTDRLPEQINPRTGRIHTSYHQAV 660
           GQ STAE VLA+LAE DYPLPKV+MQ+RS+SKLK TYTD+LP+QINPRTGRIHTSYHQAV
Sbjct: 590 GQPSTAESVLAELAEQDYPLPKVIMQHRSLSKLKGTYTDKLPQQINPRTGRIHTSYHQAV 649

Query: 661 AATGRLSSSDPNLQNIPVRTAEGRRIRQAFIAPKGYKMLAADYSQIELRIMAHLSKDEGL 720
            ATGRLSSSDPNLQNIP+RTAEGRRIRQAF+A  GYK+LAADYSQIELRIMAHL++D GL
Sbjct: 650 TATGRLSSSDPNLQNIPIRTAEGRRIRQAFVAAPGYKLLAADYSQIELRIMAHLAQDAGL 709

Query: 721 MNAFRHNLDVHTATAAEVFKVELGDVTSDQRRSAKAINFGLIYGMGAQKLGKDIGVDTKT 780
           ++AF+++LDVH ATAAEVF V L  V++DQRRSAKAINFGLIYGM A  L K I V  K 
Sbjct: 710 LHAFQNDLDVHRATAAEVFGVPLEQVSNDQRRSAKAINFGLIYGMSAFGLAKQIDVGRKE 769

Query: 781 AKAYIDVYFARYPGVREYMERTRAQASDQGYVETFFGRRLYLPDIHSNKPQERAAAERTA 840
           A+ YID YFARYPGV  YMERTR QA++QGYVET FGRRLYLP+I+S     R  AERTA
Sbjct: 770 AQEYIDRYFARYPGVLAYMERTRTQAAEQGYVETLFGRRLYLPEINSKNGAMRKGAERTA 829

Query: 841 INAPMQGTAADIIKKAMVLVDNWLTDSGLDAKVILQVHDELVLEVREDLVAEVSEKIREY 900
           INAPMQGTAADIIK+AM+ VD WL DSGLDA+VILQVHDELVLEVREDLV +V E I   
Sbjct: 830 INAPMQGTAADIIKRAMIAVDGWLQDSGLDARVILQVHDELVLEVREDLVEQVREAICPL 889

Query: 901 MSAAAQLDVPLLVEVGVGDNWDQAH 925
           MS AAQLDVPLLVE GVG+NWD+AH
Sbjct: 890 MSGAAQLDVPLLVEAGVGNNWDEAH 914