Pairwise Alignments

Query, 925 a.a., DNA polymerase I from Pseudomonas fluorescens SBW25

Subject, 934 a.a., DNA polymerase I from Vibrio cholerae E7946 ATCC 55056

 Score = 1037 bits (2682), Expect = 0.0
 Identities = 534/937 (56%), Positives = 681/937 (72%), Gaps = 26/937 (2%)

Query: 5   PLVLVDGSSYLYRAFHALPPLTTSKGLPTGAVKGVLNMLKSLRKQYPDSPFAVVFDAKGG 64
           PL+L+DGSSYLYRAFHA P   ++  +PT A+ GV+NM++S+ +Q+     AV+FDAKG 
Sbjct: 8   PLILIDGSSYLYRAFHAYPGTMSNGEIPTNAIYGVVNMIRSMMRQFASDRMAVIFDAKGK 67

Query: 65  TFRDDMYAEYKANRPSMPDDMRLQIEPLHQSVIALGFPLLCVEGVEADDVIGTLARSSAA 124
           TFRD+MY +YKA+RP MPD++R Q+EPLHQ + A+G PLL +EGVEADDVIGTLAR ++ 
Sbjct: 68  TFRDEMYDQYKAHRPPMPDELRCQVEPLHQVIRAMGLPLLAIEGVEADDVIGTLARQASQ 127

Query: 125 ADRPVVISTGDKDMAQLVDGHITLVNTMTGSAMDIEGVKEKFGVAPEQIIDYLALMGDSS 184
           A  PV+ISTGDKDMAQLVD +ITL+NTMT   +D EGV EKFG+ PE IIDYLALMGD  
Sbjct: 128 AGMPVLISTGDKDMAQLVDDNITLINTMTNVVLDREGVIEKFGIPPELIIDYLALMGDKV 187

Query: 185 DNIPGVPGIGPKTASGLLVGVNGGLKELYEQLDIVPTLPIRGAKTLPAKLEEHKEMAFLS 244
           DNIPGVPG+G KTA+ LL G+ GGL+ LY  LD +  L  RG+KT+  KLEE++  A LS
Sbjct: 188 DNIPGVPGVGEKTATALLQGI-GGLEALYANLDKIAALGFRGSKTMAQKLEENRGNAKLS 246

Query: 245 YQLATIKIDVPLDVGLDDLHLIEPDREKLLELYTLLEFKSWFDEIQRDAKRV-----ELK 299
           YQLATIK DV L+     L    PDR+ L+ LY  L FKSW  E+      +     + K
Sbjct: 247 YQLATIKCDVELEESPQTLLKQTPDRDALMSLYGKLAFKSWLTELLDGGTGIVTADEQTK 306

Query: 300 AAPVVEDVAEVAAPA----------EATYTTILDQATFDIWLKKLNDAKLFAFDTETTGI 349
            + V    A   A A           + Y TIL++  F +WL+KL  A+LFAFDTET  +
Sbjct: 307 TSSVTVSTAATHAAAIPESPAAHIDRSQYQTILNEQDFQLWLEKLKQAELFAFDTETDNL 366

Query: 350 DAQQAQLVGVSFAVQPHEAAYIPLTHAYIGAPEQLDRDTVLLALKPLLEDPTKLKVGQHA 409
           D   A LVG+SFAV   EAAY+P+ H Y+ AP+QL+RD V+  LKPLLED +K KVGQ+ 
Sbjct: 367 DYMVANLVGMSFAVAEGEAAYLPVAHDYLDAPQQLERDWVIAQLKPLLEDESKAKVGQNL 426

Query: 410 KFDMNILANCAIGGDPAHGITVRGIAFDTMLESYVLNATATRHDMDSLAKKYLDYDTVAF 469
           K+D +++A         +G+ +RGI  DTML+SYV N+   +HDMDSLA ++L +  ++F
Sbjct: 427 KYDASVMAR--------YGVELRGIRHDTMLQSYVYNSVGGKHDMDSLALRFLQHSCISF 478

Query: 470 QDIAGKGAKQLTFDQIALEQAGPYAAEDADVTLRLHQALFAQLSAIPSLASVLTDIEIPL 529
           + +AGKG  QLTF+QIALE+A  YAAEDADVTLRLHQ +   +     L  V  +IE+PL
Sbjct: 479 EQVAGKGKNQLTFNQIALEEAAQYAAEDADVTLRLHQRIHPLIEQDAKLEQVYREIEMPL 538

Query: 530 VPVLARIERQGALVDKDLLGIQSIELGNKMVELERQAFEIAGEEFNLGSPKQLGAILYEK 589
           VPVL+RIER G ++D  LL  QS E+  ++ +LE+ A+E+AG+ FNL SPKQL  IL+E+
Sbjct: 539 VPVLSRIERTGVMIDDMLLSAQSQEIALRLDQLEQNAYELAGQPFNLSSPKQLQTILFEQ 598

Query: 590 LGLPVLKKTGKGQASTAEEVLAKLAEDDYPLPKVLMQYRSMSKLKSTYTDRLPEQINPRT 649
           + LPVL+KT  G  ST EEVL +LA D YPLPKVL++YR ++KLKSTYTD+LP+ INP T
Sbjct: 599 MKLPVLQKTPSGTPSTNEEVLQELALD-YPLPKVLIEYRGLAKLKSTYTDKLPKMINPST 657

Query: 650 GRIHTSYHQAVAATGRLSSSDPNLQNIPVRTAEGRRIRQAFIAPKGYKMLAADYSQIELR 709
           GR+HTSYHQAV ATGRLSS+DPNLQNIPVR  EGRRIRQAF+AP G+K++A DYSQIELR
Sbjct: 658 GRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFVAPHGWKIMAVDYSQIELR 717

Query: 710 IMAHLSKDEGLMNAFRHNLDVHTATAAEVFKVELGDVTSDQRRSAKAINFGLIYGMGAQK 769
           IMAHLS D+ L++AFR   D+H ATAAE+  V +  V+S+QRR AKA+NFGLIYGM A  
Sbjct: 718 IMAHLSGDQALLDAFRDGKDIHAATAAEIIGVPIDQVSSEQRRRAKAVNFGLIYGMSAFG 777

Query: 770 LGKDIGVDTKTAKAYIDVYFARYPGVREYMERTRAQASDQGYVETFFGRRLYLPDIHSNK 829
           L K +G+    A+ Y+D YF RYPGV +YME TR++A+  GYVET FGRRL+LP+I S  
Sbjct: 778 LAKQLGIPRGEAQEYMDKYFERYPGVMQYMEDTRSRAAQLGYVETIFGRRLHLPEITSRN 837

Query: 830 PQERAAAERTAINAPMQGTAADIIKKAMVLVDNWLTDSGLD-AKVILQVHDELVLEVRED 888
              R AAER AINAPMQGTAADIIKKAM+LVD W+   G    K+++QVHDELV EV+E 
Sbjct: 838 AMRRKAAERAAINAPMQGTAADIIKKAMLLVDEWIEREGDGRVKLLMQVHDELVFEVKES 897

Query: 889 LVAEVSEKIREYMSAAAQLDVPLLVEVGVGDNWDQAH 925
            ++E+  K+++ M +AA+L VPL+ E G GDNW+QAH
Sbjct: 898 SLSEIESKVQQLMESAAELAVPLVAEAGHGDNWEQAH 934