Pairwise Alignments

Query, 925 a.a., DNA polymerase I from Pseudomonas fluorescens SBW25

Subject, 1004 a.a., DNA polymerase I from Sinorhizobium meliloti 1021

 Score =  664 bits (1713), Expect = 0.0
 Identities = 414/1019 (40%), Positives = 563/1019 (55%), Gaps = 120/1019 (11%)

Query: 6    LVLVDGSSYLYRAFHALPPLTT-SKGLPTGAVKGVLNMLKSLRKQYPDSP-------FAV 57
            L LVDGS +++RAFHA+PPL   S GLP  AV G  NML  L     D+         AV
Sbjct: 7    LFLVDGSGFIFRAFHAIPPLNRKSDGLPVNAVAGFCNMLWKLLTDARDTSVGVTPTHLAV 66

Query: 58   VFDAKGGTFRDDMYAEYKANRPSMPDDMRLQIEPLHQSVIALGFPLLCVEGVEADDVIGT 117
            +FD    TFR+ +Y +YKANR + P+D+  Q   +  +  A   P +  EG EADD+I T
Sbjct: 67   IFDYSSKTFRNGLYDQYKANRTAPPEDLIPQFGLIRHATRAFNLPCIEKEGYEADDLIAT 126

Query: 118  LARSSAAADRPVVISTGDKDMAQLVDGHITLVNTMTGSAMDIEGVKEKFGVAPEQIIDYL 177
             AR +  A   V I + DKD+ QLV   +++ ++M    + +  V EK+GV PE++ID  
Sbjct: 127  YARLAEEAGADVTIVSSDKDLMQLVTPKVSMYDSMKDKQITVPDVIEKWGVPPEKMIDLQ 186

Query: 178  ALMGDSSDNIPGVPGIGPKTASGLLVGVNGGLKELYEQLDIVPTLPIRGAKTLPAKLEE- 236
            A+ GDS+DN+PG+PGIGPKTA+ LL        E Y  LD   TL  R  +    K  E 
Sbjct: 187  AMTGDSTDNVPGIPGIGPKTAAQLL--------EEYGDLD---TLLARAGEIKQQKRRES 235

Query: 237  ---HKEMAFLSYQLATIKIDVPLDVGLDDLHLIEPDREKLLELYTLLEFKSWFDEI---- 289
               + ++A LS +L T+K D PLDV  +D  L   D  KL+     +EF +    +    
Sbjct: 236  IIANADLARLSRELVTLKKDTPLDVPPEDFRLDSQDGPKLIAFLKAMEFTTLTRRVAAAT 295

Query: 290  QRDAKRVELKAAPVV---------EDVAEVAAP--------------------------- 313
              DA+ +E    PV           DV E   P                           
Sbjct: 296  DTDAEAIEPAHVPVEWGAQAHGPDLDVGEAGGPPPSPQSSSATPPRGNAARAAVSFLSSG 355

Query: 314  ---------------AEATY-----------TTILDQATFDIWLKKLNDAKLFAFDTETT 347
                           A A Y            TI D  T + W+    +A L  FDT+ T
Sbjct: 356  QDADTTGATPTGLAEARAAYFGKAPFDHSGYRTIRDIDTLERWIADAREAGLVGFDTQAT 415

Query: 348  GIDAQQAQLVGVSFAVQPH---------EAAYIPLTH------AYIGAP--EQLDRDTVL 390
              DA +A LVG S AV  +          AAY+PL H         G P   Q+     L
Sbjct: 416  SPDAMRADLVGFSLAVADYANDPSGSRIRAAYVPLAHKSGVSDLLGGGPVDSQVPGRETL 475

Query: 391  LALKPLLEDPTKLKVGQHAKFDMNILANCAIGGDPAHGITVRGIAFDTMLESYVLNATAT 450
              LK LLEDP+ LKVGQ+ K+   ++          HGI +R    DTML SYVL+A   
Sbjct: 476  SRLKELLEDPSVLKVGQNLKYGYLVMKR--------HGIAMRSFD-DTMLMSYVLDAGNG 526

Query: 451  RHDMDSLAKKYLDYDTVAFQDIAGKGAKQLTFDQIALEQAGPYAAEDADVTLRLHQALFA 510
             H MDSLA+++L +  +A++D+ G G   LTFD + +++A  YAAEDAD+ LRL   L  
Sbjct: 527  AHGMDSLAERWLGHTPIAYKDVTGTGRSSLTFDFVDIDKATAYAAEDADIALRLWHVLKP 586

Query: 511  QLSAIPSLASVLTDIEIPLVPVLARIERQGALVDKDLLGIQSIELGNKMVELERQAFEIA 570
            +L+A   L  V   +E PL+ VLA +E +G  VD+ +L   S EL      LE + + +A
Sbjct: 587  RLAA-KGLTRVYERLERPLISVLAGMEERGITVDRQILSRLSGELAQGAAALEDEIYRLA 645

Query: 571  GEEFNLGSPKQLGAILYEKLGLPVLKKTGKGQASTAEEVLAKLAEDDYPLPKVLMQYRSM 630
            GE F +GSPKQLG IL+ K+GLP   KT  GQ ST+ +VL  LA   + LP+ ++ +R +
Sbjct: 646  GETFTIGSPKQLGDILFGKMGLPGGSKTKTGQWSTSAQVLEDLAAAGHDLPRKIVDWRQL 705

Query: 631  SKLKSTYTDRLPEQINPRTGRIHTSYHQAVAATGRLSSSDPNLQNIPVRTAEGRRIRQAF 690
            +KLKSTYTD LP  ++P T R+HT +  A   TGRLSSSDPNLQNIP+RT EGR+IR AF
Sbjct: 706  TKLKSTYTDALPGFVHPETKRVHTCFAMAATTTGRLSSSDPNLQNIPIRTGEGRKIRTAF 765

Query: 691  IAPKGYKMLAADYSQIELRIMAHLSKDEGLMNAFRHNLDVHTATAAEVFKVELGDVTSDQ 750
            +A  G+K+++ADYSQIELR++AH++    L  AF   +D+H  TA+E+F V +  + S+ 
Sbjct: 766  VATPGHKLVSADYSQIELRVLAHVADIPQLRQAFADGVDIHAMTASEMFGVPVDGMPSEI 825

Query: 751  RRSAKAINFGLIYGMGAQKLGKDIGVDTKTAKAYIDVYFARYPGVREYMERTRAQASDQG 810
            RR AKAINFG+IYG+ A  L   + ++   A  YI  YF R+PG+R+YME T+A A + G
Sbjct: 826  RRRAKAINFGIIYGISAFGLANQLSIERSEAGDYIKRYFERFPGIRDYMENTKAFARENG 885

Query: 811  YVETFFGRRLYLPDIHSNKPQERAAAERTAINAPMQGTAADIIKKAMVLVDNWLTDSGLD 870
            YVET FGRR + PDI S+ P  RA  ER +INAP+QG+AADII++AMV ++  L  + L 
Sbjct: 886  YVETIFGRRAHYPDIRSSNPSMRAFNERASINAPIQGSAADIIRRAMVKMEPALEAAKLS 945

Query: 871  AKVILQVHDELVLEVREDLVAEVSEKIREYMSAAA----QLDVPLLVEVGVGDNWDQAH 925
            A+++LQVHDEL+ EV +  +      I   M  AA     + VPL V+     NWD+AH
Sbjct: 946  ARMLLQVHDELIFEVEDGEIERTIPVIISVMENAAMPALDMRVPLKVDARAAHNWDEAH 1004