Pairwise Alignments

Query, 203 a.a., tyrosine-type recombinase/integrase from Paraburkholderia sabiae LMG 24235

Subject, 487 a.a., integrase from Bifidobacterium breve UCC2003

 Score = 80.5 bits (197), Expect = 5e-20
 Identities = 57/178 (32%), Positives = 88/178 (49%), Gaps = 8/178 (4%)

Query: 3   AVDRTTVPGRRDYALFSLMFNTGARVQEVPDLRLCDLRLQRPCQVRLQGKGNKVRVCPIW 62
           A D      RR+  L  LM++T AR+ E+  L L D+R+  P ++ + GK  K R+ P+ 
Sbjct: 245 AWDTGDAKSRRNRMLPILMYDTAARIGELAALTLEDVRMDEPARITITGKRGKTRIVPMG 304

Query: 63  PQTARLLQRLVEE---RPYALDATTALFVNNRGDKLTRFGV---YYLLRRHLATAEANVP 116
            +T R L   ++E        D    LF + R   +    V     +L+   + A    P
Sbjct: 305 ERTRRHLTSYLDEFHPDTDGSDGARPLFHSTRNGTIRPLSVDRIDEILKTAASKARGTCP 364

Query: 117 TLREKRIHPHSLRHTTALSLLKSGVDFPTISQWLGHASLDTTMR-YAKSDIDMKRQAL 173
           ++   RIH   +R T A+ L + GV  PT+ Q LGH S+ TT   YA + +DM R+A+
Sbjct: 365 SM-PGRIHCRLIRRTRAMDLYQQGVPLPTVMQLLGHESMSTTSAFYAFATLDMMRKAV 421