Pairwise Alignments

Query, 391 a.a., efflux RND transporter periplasmic adaptor subunit from Paraburkholderia sabiae LMG 24235

Subject, 409 a.a., RND family efflux transporter, MFP subunit from Pseudomonas stutzeri RCH2

 Score =  306 bits (785), Expect = 5e-88
 Identities = 174/358 (48%), Positives = 228/358 (63%), Gaps = 8/358 (2%)

Query: 33  GAVADARAADAPAPAVEVDVATVLSRTVTDWQSYSGRLEAVDHVDVRPLVSGTIVAIHFT 92
           G   +A  +  P PAV V  A V+ + VT+W   +GRLEA + V++RP VSG I    F 
Sbjct: 24  GKAPEATQSGMPPPAVSV--AEVIEQQVTEWDELTGRLEAPESVEIRPRVSGFIDKAAFE 81

Query: 93  DGALVKKGEPLFSIDPRPYQAEVDRAAAQVAAAKARALYTSTDAARAERLLVDNAIAKRD 152
           +GALVKKG+ LF IDPRP+QAEV R  AQ+  A+A    T  +A R ERL   NAI+   
Sbjct: 82  EGALVKKGDLLFQIDPRPFQAEVKRLQAQLQQARAIQQRTVAEAERGERLRQKNAISAEL 141

Query: 153 YDEKQNAAREASAAVKAADAAFEAAQVSLGYTTITAPVSGRVSRAELTVGNVVSAGANAP 212
            D + +AA EA +A  A  A  + AQ+ L +T +TAP+ GRV RA +T GN+V+A  +  
Sbjct: 142 ADARVSAASEARSATAAIQAQLDRAQLDLSFTRVTAPIDGRVGRALITSGNLVNA--SEA 199

Query: 213 LLTTLVSVSPIYASFDVDEQTYLRY--LGR--DRQAKVPVALGLANEDGYSRKGTISSVD 268
           LLTTLVS   +YA F+ DE+TYL+Y  L R  DR    PV LGL++EDG+   G +  VD
Sbjct: 200 LLTTLVSTDKVYAYFEADERTYLKYRELARNGDRGETTPVYLGLSSEDGHPHLGHMDFVD 259

Query: 269 NRLDTQSATIRVRATIDNRDGALVPGLYARVKVGGGDAHPAVLIDDAAIGTDQSKKYVLV 328
           N++D ++ TIR RA  DNRDG+  PGLYAR+K+ G   + AVLI D A+GTD  KK+VLV
Sbjct: 260 NQVDPRTGTIRGRAVFDNRDGSFTPGLYARLKLVGSATYDAVLIKDVAVGTDLGKKFVLV 319

Query: 329 VNDVNKVQYREVQLGALHDNLRVIDAGLKPGERIVVNGLMRARPNDTVKPHPVDMTDA 386
           + +   V YR V+LG   + LR++ +GL  GE IVVNGL R RP   V+P  V M DA
Sbjct: 320 LAEDGTVAYRPVELGPKLEGLRIVRSGLAKGESIVVNGLQRVRPGSPVQPESVPMADA 377