Pairwise Alignments

Query, 391 a.a., efflux RND transporter periplasmic adaptor subunit from Paraburkholderia sabiae LMG 24235

Subject, 440 a.a., efflux transporter, RND family, MFP subunit (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  186 bits (471), Expect = 1e-51
 Identities = 125/373 (33%), Positives = 189/373 (50%), Gaps = 7/373 (1%)

Query: 11  AVSAVAVLGAAAGAGLVRGVGPGAVADARAADAPAPAVEVDVATVLS--RTVTDWQSYSG 68
           A S +  L   A   ++  +  G      AA A      V VAT L+  R +       G
Sbjct: 38  AASLLPALPTMAVLAVLLAMLAGCSGGDDAAKAKPQKRPVPVATALAEKRDLPVVVRTVG 97

Query: 69  RLEAVDHVDVRPLVSGTIVAIHFTDGALVKKGEPLFSIDPRPYQAEVDRAAAQVAAAKAR 128
            +E    V V+  V G +V +HF +G  V+KG+ LFS+D R  +A +  A A++   +  
Sbjct: 98  NVEPYATVSVKSRVDGQVVGVHFKEGQDVRKGDLLFSVDRRALEAALSEAQARLQRDRVL 157

Query: 129 ALYTSTDAARAERLLVDNAIAKRDYDEKQNAAREASAAVKAADAAFEAAQVSLGYTTITA 188
                 D  R E+L+ D  +++  Y++ +++A    A V+A +A+ E A+V L YTTITA
Sbjct: 158 LAKADEDVRRFEKLVADGYVSRDQYEQYRSSADSLRATVRADEASVETARVQLSYTTITA 217

Query: 189 PVSGRVSRAELTVGNVVSAGANAPLLTTLVSVSPIYASFDVDEQTYLRYLGRDRQAKVPV 248
           P+SGR  + ++  GN+V AGA+  +L  +  + PIY  F + E        R     VPV
Sbjct: 218 PMSGRAGQVKVDQGNMVRAGADT-VLVVIDQIEPIYVGFALPEMHLATARARMAAGGVPV 276

Query: 249 AL---GLAN-EDGYSRKGTISSVDNRLDTQSATIRVRATIDNRDGALVPGLYARVKVGGG 304
                G AN   G S +GT+S VDN ++T + TIR+R T  N    L PG +  V V  G
Sbjct: 277 QARVPGSANGAGGVSARGTVSFVDNTVNTATGTIRMRGTFANEARVLWPGQFVDVYVELG 336

Query: 305 DAHPAVLIDDAAIGTDQSKKYVLVVNDVNKVQYREVQLGALHDNLRVIDAGLKPGERIVV 364
           +   AV++   A+ T     +  VV   N VQ R+V+ G  HD   VI+ G+  GER+V+
Sbjct: 337 EVPGAVVVPAQAVQTGSQGLFAYVVVQDNTVQLRKVRTGLAHDGQVVIEEGVAAGERVVI 396

Query: 365 NGLMRARPNDTVK 377
           +G +R  P   V+
Sbjct: 397 DGHLRLTPGAVVE 409