Pairwise Alignments

Query, 391 a.a., efflux RND transporter periplasmic adaptor subunit from Paraburkholderia sabiae LMG 24235

Subject, 404 a.a., efflux transporter, RND family, MFP subunit (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  236 bits (603), Expect = 7e-67
 Identities = 131/356 (36%), Positives = 201/356 (56%), Gaps = 8/356 (2%)

Query: 34  AVADARAADAPAPAVEVDVATVLSRTVTDWQSYSGRLEAVDHVDVRPLVSGTIVAIHFTD 93
           A  D+R A  P P  +V VA      V ++  ++G +  V+ VD+   V+G + +  F D
Sbjct: 28  AGCDSRNAFVPPPPPKVTVAPPRVGPVVEYMEFTGTIAPVESVDITARVTGVLRSAQFRD 87

Query: 94  GALVKKGEPLFSIDPRPYQAEVDRAAAQVAAAKARALYTSTDAARAERLLVDNAIAKRDY 153
           G++V+KG+PLF I+P P+QA + RA A++   +A      T+ AR+ +LL + A ++ D 
Sbjct: 88  GSMVRKGDPLFLIEPEPFQAALQRAEAELEVQRASLDRAETELARSRKLLSEKAGSEADV 147

Query: 154 DEKQNAAREASAAVKAADAAFEAAQVSLGYTTITAPVSGRVSRAELTVGNVVSAGANAPL 213
              Q     + A +  A A  E A++ LGYT I AP  G+++R  +  GNVV  GA    
Sbjct: 148 VRWQQQRDSSKAGISRASAQIETARIDLGYTRIVAPFDGQMTRRLVDPGNVVGPGA-VTK 206

Query: 214 LTTLVSVSPIYASFDVDEQTYLRYLG-RDRQAK------VPVALGLANEDGYSRKGTISS 266
           L T+V    ++  F ++E+  LR +G + R  K      +P+ L LA+ED +   G +  
Sbjct: 207 LATIVRRDQVHVYFSINERDLLRLMGDKPRNGKNGTPPELPLELALADEDAFPHAGKLEY 266

Query: 267 VDNRLDTQSATIRVRATIDNRDGALVPGLYARVKVGGGDAHPAVLIDDAAIGTDQSKKYV 326
            D  +D  + T+ +R    N  G LVPGLYAR++V  G    A+L+ + A+G DQS  YV
Sbjct: 267 ADPTVDPSTGTLLLRGIFPNTGGRLVPGLYARIRVAMGRRDAALLVPERALGQDQSGSYV 326

Query: 327 LVVNDVNKVQYREVQLGALHDNLRVIDAGLKPGERIVVNGLMRARPNDTVKPHPVD 382
           +V+N  N  + R V+LGALH+  RV++ GL+ G+R+VVNG+ RARP   V P   D
Sbjct: 327 MVINAQNVAEQRPVKLGALHEGWRVVEKGLEAGDRVVVNGMQRARPGSPVDPVAAD 382