Pairwise Alignments

Query, 573 a.a., nicotinate phosphoribosyltransferase from Paraburkholderia sabiae LMG 24235

Subject, 490 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  427 bits (1097), Expect = e-124
 Identities = 241/547 (44%), Positives = 326/547 (59%), Gaps = 62/547 (11%)

Query: 15  LVPFNLADFYKTGHPSMYPAETTKLVANFTPRSAKYAPVLPELFDGKIVWYGLQGFIKEF 74
           L P    D YK  H   YP  T  + +N T R ++        +  ++V++GLQ FIK +
Sbjct: 3   LNPVTAIDGYKVDHRRQYPDNTQVIFSNLTARKSRRG------YTDQMVFFGLQYFIKHY 56

Query: 75  FLDVFNREFFGAKTKGQAVRKYRRRMDNALGKGVVSVDNLEALYELGYLPLEVRALPEGA 134
            +D +NR+FF  + K Q + ++ RR++N LG   V   ++E L++LGYLP+++ ALPEG+
Sbjct: 57  LIDSWNRDFF-QQPKEQVICQFSRRINNYLGPNNVGTQHIEELHDLGYLPIKIMALPEGS 115

Query: 135 RVNIKVPPVLFISTHDDFPWVATYIETIFSAENWKPSTVATIAFEFRKLLTYFAKLTGSP 194
              +KVP ++  +T + F W+  Y+ETI SA  W   T AT A ++RK+   +A  T   
Sbjct: 116 VYPLKVPCLILYNTDERFFWLTNYLETILSANVWGMCTSATTALQYRKIFEAYALETDGD 175

Query: 195 EELIDWLGHDFSMRGMSGVHDAMRCGGGHDLSFTGTDTIPSIDYLEDFYGANSDLEVVGG 254
              +DW GHDFS RGM GV  A+  G  H LSFTGTDTIP+ID+LE +Y A+SD E+VGG
Sbjct: 176 IAFVDWQGHDFSFRGMYGVEAAIMSGAAHLLSFTGTDTIPAIDFLEQYYLADSDKELVGG 235

Query: 255 SIPATEHSVMTLRILLTLKHIVSDPANAGKSEKALRRIAEREVIRELVTRDYPAGMLSIV 314
           S+PATEHSVM                 AG  E  L      E  R L+   YP G++SIV
Sbjct: 236 SVPATEHSVMC----------------AGGMENEL------ETFRRLIEDIYPTGIVSIV 273

Query: 315 ADSFDYWNTITAVARDLKDEILARQPDELGRCKIVFRPDSGDPVKILTGYFADELVCNSV 374
           +DS+D+W  +T     LKD ILAR        K+VFRPD+G PVKI+ G           
Sbjct: 274 SDSWDFWQVMTEFTLALKDRILARDG------KVVFRPDTGCPVKIICG----------- 316

Query: 375 GTAVAGEDGMYEVNDGSGMRITEAERKGSVECLWDIFGGTTTDKGFKVLDSHVGLIYGDS 434
                               I   E KG++ECLWD+FGG+TT KG+K+LDSHVGLIYGDS
Sbjct: 317 ---------------DPQAPIGSPEYKGAIECLWDVFGGSTTAKGYKLLDSHVGLIYGDS 361

Query: 435 ISLPRARDILLRLVRKNFASCNVVFGIGSYTYNMISRDTFGWAMKAIYAEVGDEQIAIYK 494
           I++ RA  I   L  K FAS N+VFGIGS+TY  ++RDT G+A+KA +A+V  +   I+K
Sbjct: 362 ITIERAEAICAGLKAKGFASTNIVFGIGSFTYQHVTRDTDGYAVKATFAKVDGKDREIFK 421

Query: 495 DPATDDGTKKSAKGLLRVEK-VGNDYVLYEEQTLEQFDGGELVPVFRNGELLAETTLAEM 553
           DP TDDGTKKSAKGL+ V K     + L ++ + +  +  E VPVF +GELL E +LA++
Sbjct: 422 DPKTDDGTKKSAKGLVAVFKDEQGQFYLKDQASWQDVNNCEFVPVFADGELLTEYSLADI 481

Query: 554 RARLRAS 560
           RARL AS
Sbjct: 482 RARLAAS 488