Pairwise Alignments

Query, 404 a.a., macrolide transporter subunit MacA from Paraburkholderia sabiae LMG 24235

Subject, 430 a.a., efflux transporter, RND family, MFP subunit (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 97.1 bits (240), Expect = 9e-25
 Identities = 111/406 (27%), Positives = 173/406 (42%), Gaps = 62/406 (15%)

Query: 16  LVAALAVLLMWDWFVP--DTRVQYL-TAKVERGDLENAVLATGTL--QAFSQVDVGSQAS 70
           L  ALAV L+  +F+   + R +   TA V R  +   + ATG +  +  + V  G++ +
Sbjct: 9   LAIALAVALIAAYFLSRREGRTEITQTATVSRATVRKVLDATGIIKPEVGAIVKTGTRFT 68

Query: 71  GQLRALKVKLGDKVVKDQWLAEIDPVLSENALRQAHTTVDNLVS-----------QRRAT 119
           G +R + VK+GD V   Q +AEID         QA  T+    S           Q R  
Sbjct: 69  GIIRTMHVKVGDAVKAGQIIAEIDDREQRAQQDQAEATLRKAQSELARVEASYPLQIREA 128

Query: 120 AAQLA--QAD-----LALARQRKMIADDATAHQDLESAQAAA-------GVQRATFSALD 165
            AQ+A  QAD     L L R+R ++  D  A   L+ A+  +         ++AT   L 
Sbjct: 129 EAQMAAAQADYDYAALNLKRRRTLVEQDLDARNTLDEAKQQSETTGNTLAARKATLDRLQ 188

Query: 166 AQ----IRAARIQVETAQA-------NLGYTRIVAPMGGEVVAIVTQEGQTVIAQQQAPV 214
            +    I+ AR  V+ AQ+        L Y+ I AP+ G V  +  Q G+TV+A  Q   
Sbjct: 189 RESTLAIKTAREAVKEAQSALEATNVRLSYSVIRAPLDGVVSEVTAQGGETVVAGFQVAN 248

Query: 215 ILKLANLDTMTVKAQISEADVIRVHPGQTAWFTILGAPDTRYYGRLRAIEPAPQNFLDTQ 274
           ++ + +   + +   + E DV ++ PG T  F +   P   + G +  I P P+      
Sbjct: 249 LITVLDPTRLEMWIYVDETDVGQITPGMTVEFRVDSLPGRTFGGTVNQIYPQPE------ 302

Query: 275 TSPGGTGSASSKPGTAIFYNALFEV-PNPGHLLRISMTAQVSVLISTAHDVLSVPVAALG 333
                           ++Y AL  + P     LR  MT Q  +++    +VL+VP  AL 
Sbjct: 303 -----------IRDNIVYYRALVRLTPQTSTDLRPEMTTQCRIVVQQKDNVLAVPNEAL- 350

Query: 334 AKTPDGRYAVRVAGADEQVQTRLVHTGLNNNVRVEIRDGLRAGERV 379
            K   G   V V G D  ++      GL      E+ +GL  G+ V
Sbjct: 351 -KWVGGEQVVFVQG-DGAIRRVRPRIGLAGAETSEVLEGLAEGDVV 394