Pairwise Alignments

Query, 302 a.a., transcriptional regulator GcvA from Paraburkholderia sabiae LMG 24235

Subject, 303 a.a., DNA-binding transcriptional activator GcvA (RefSeq) from Shewanella amazonensis SB2B

 Score =  197 bits (501), Expect = 3e-55
 Identities = 113/290 (38%), Positives = 161/290 (55%), Gaps = 2/290 (0%)

Query: 1   MFDRLPPLQTLRAFEATARLLSMTLAAEELHVTHGAVSRHVKTLETHLGVPLFRRLTRRI 60
           M  RLPPL  ++AFEA AR LS T AAEEL VT  AVS  +K LE  LG+ LFRR  R +
Sbjct: 1   MSRRLPPLNAVKAFEAAARHLSFTRAAEELFVTQAAVSHQIKALEDFLGLKLFRRKNRSL 60

Query: 61  VLTDQGAEFHAAVARLLGELTREAERLRGNDSASRMTISTSVSFASKWLASRLHNLKALH 120
           +LT++G  +   +  +  +L+   +RL    +   +T+S S SFA +WL  RL      +
Sbjct: 61  LLTEEGQSYFLDIKDIFTQLSDATDRLLARSAIGSLTVSMSPSFAIQWLVPRLAKFSEKN 120

Query: 121 PELDVHLDVTDLNVDLEDGLVDVAVRYGGGRYVGAQSERILEEFVTPVCSPRYRDEMGGL 180
           P++DV +   D         VDVA+ YG G + G +++++  E + PVCSP   +    L
Sbjct: 121 PDIDVRIKAVDSEEGSLTDDVDVAIYYGQGSWPGLRADKLRNEVLIPVCSPMLLNGHKPL 180

Query: 181 PDPASLTRCTLLHEARMLANWDQWFAFAGVDRRRSVRGPAYSHGSMAIEAAIRDEGVALG 240
             PA L   TLLH+     +W  WF   GV      +GP +SH S+ ++AA   +GVALG
Sbjct: 181 ETPADLKHHTLLHDMSR-HDWQAWFRQCGVTDVNVNQGPIFSHSSLVLQAAAHGQGVALG 239

Query: 241 RSVLVRDDLMAGRLVALFPQISLKAERGYDLVYRVGSQNNPKVNALRDWL 290
            SVL R D+ AGRLV  F ++ L ++  Y LV +       K+ A R+W+
Sbjct: 240 YSVLARPDIKAGRLVVPFQEV-LVSKDAYYLVCQQNHAELGKIVAFREWM 288