Pairwise Alignments

Query, 315 a.a., lyase from Paraburkholderia sabiae LMG 24235

Subject, 457 a.a., PE-PGRS family protein PE_PGRS18 from Mycobacterium tuberculosis H37Rv

 Score = 56.6 bits (135), Expect = 1e-12
 Identities = 39/139 (28%), Positives = 62/139 (44%), Gaps = 5/139 (3%)

Query: 44  GAVGRLDPRTGKTERIPLGNGSAPHGVIVGPDGAAWITDGGLNAIVRVDPKTLAVARFPL 103
           G VG      G    I   + + PHGV V P G  ++T+ G N +  +DP T  V     
Sbjct: 271 GGVGGAGGAAGAVTTITHASFNDPHGVAVNPGGNIYVTNQGSNTVSVIDPVTNTVTGSIT 330

Query: 104 PPDRPNANLNTAVFDKRGHLWFTG-QAGIYGELDPGSGSMRVFDAPRGPGAYGICVTPDG 162
             + P+     AV    G ++ T   +     +DP + ++     P G GAYG+ V P G
Sbjct: 331 DGNGPS---GVAVSPVTGLVFVTNFDSNTVSVIDPNTNTV-TGSIPVGTGAYGVAVNPGG 386

Query: 163 SLYFASLAGSYLGRIDPVS 181
           ++Y  +   + +  IDP +
Sbjct: 387 NIYVTNQFSNTVSVIDPAT 405



 Score = 45.8 bits (107), Expect = 2e-09
 Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 4/88 (4%)

Query: 19  VPSGSAPHDVAPEP-GGAVWYTAQAQGAVGRLDPRTGK-TERIPLGNGSAPHGVIVGPDG 76
           +  G+ P  VA  P  G V+ T      V  +DP T   T  IP+G G+  +GV V P G
Sbjct: 329 ITDGNGPSGVAVSPVTGLVFVTNFDSNTVSVIDPNTNTVTGSIPVGTGA--YGVAVNPGG 386

Query: 77  AAWITDGGLNAIVRVDPKTLAVARFPLP 104
             ++T+   N +  +DP T  V   P+P
Sbjct: 387 NIYVTNQFSNTVSVIDPATNTVTGSPIP 414



 Score = 42.0 bits (97), Expect = 3e-08
 Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 1/65 (1%)

Query: 19  VPSGSAPHDVAPEPGGAVWYTAQAQGAVGRLDPRTGKTERIPLGNGSAPHGVIVGP-DGA 77
           +P G+  + VA  PGG ++ T Q    V  +DP T      P+  G  P GV V P  G 
Sbjct: 371 IPVGTGAYGVAVNPGGNIYVTNQFSNTVSVIDPATNTVTGSPIPVGLDPTGVAVNPVTGV 430

Query: 78  AWITD 82
            ++T+
Sbjct: 431 VYVTN 435



 Score = 36.2 bits (82), Expect = 2e-06
 Identities = 35/154 (22%), Positives = 63/154 (40%), Gaps = 11/154 (7%)

Query: 127 GQAGIYGELDPGSGSMRVFDAPRGPGAYGICVTPDGSLYFASLAGSYLGRIDPVSGAAQV 186
           G AG  G     +G++           +G+ V P G++Y  +   + +  IDPV+    V
Sbjct: 268 GGAGGVGGAGGAAGAVTTITHASFNDPHGVAVNPGGNIYVTNQGSNTVSVIDPVTNT--V 325

Query: 187 IEPPTPEQGARRV-WSDSKGRVWISEWNAGKVGVFDPAAHRWREWKLPGSDP---HVYAI 242
               T   G   V  S   G V+++ +++  V V DP  +      + GS P     Y +
Sbjct: 326 TGSITDGNGPSGVAVSPVTGLVFVTNFDSNTVSVIDPNTN-----TVTGSIPVGTGAYGV 380

Query: 243 FVDDKDIVWLSEWSTNALVRFDPKTERFETFALP 276
            V+    ++++   +N +   DP T       +P
Sbjct: 381 AVNPGGNIYVTNQFSNTVSVIDPATNTVTGSPIP 414