Pairwise Alignments

Query, 466 a.a., tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE from Paraburkholderia sabiae LMG 24235

Subject, 453 a.a., tRNA modification GTPase TrmE (RefSeq) from Shewanella amazonensis SB2B

 Score =  417 bits (1071), Expect = e-121
 Identities = 230/465 (49%), Positives = 306/465 (65%), Gaps = 18/465 (3%)

Query: 6   SDPIVAIATAPGRGGIGVVRISFGRAGEAAAQPMMQALTGQALAPRHASYVPFLDSGGNA 65
           +D IVA ATAPGRGG+G++R+S   A + A       L G    PR+A +  F  + G+ 
Sbjct: 3   TDTIVAQATAPGRGGVGIIRVSGKLASDVA-----HTLLGHLPKPRYADFCDFKAADGSV 57

Query: 66  LDRGIALYFPAPHSYTGEHVLELQGHGGPIVLQLVLQRCIDAGRAFGLRLAEPGEFTRRA 125
           +D+GIAL+F  P+S+TGE VLELQGHGG +V+ ++++  +   +  G+R+A PGEF+ +A
Sbjct: 58  IDQGIALFFKGPNSFTGEDVLELQGHGGQVVMDMLIRAVL---KVKGVRIARPGEFSEQA 114

Query: 126 FLNDKLDLAQAEAVADLIEASTEAAARSAGRSLDGAFSRDIHALVEDVITLRMLVEATLD 185
           F+NDKLDL QAEA+ADLI+A++E AA+SA  SL G FS  +H LV+ +  LR+ VEA +D
Sbjct: 115 FMNDKLDLTQAEAIADLIDATSEQAAKSALHSLQGEFSTQVHTLVDKITNLRLYVEAAID 174

Query: 186 FPEEEIDFLEAADARGKLARIRERLALVLSEARQGALLREGLSVVLAGQPNVGKSSLLNA 245
           FP+EE+DFL        L  I ++L  V + A+QG+++REG+ VV+AG+PN GKSSLLNA
Sbjct: 175 FPDEEVDFLSDGKIAAALYAIIDQLDEVQASAKQGSIIREGMKVVIAGRPNAGKSSLLNA 234

Query: 246 LAGAELAIVTPIAGTTRDKVAQTIQVEGIPLHVIDTAGLRETEDEVEKIGIERTWGEIER 305
           LAG E AIVT IAGTTRD + + I ++G+PLH+IDTAGLR+T DEVE+IGIER W EI  
Sbjct: 235 LAGKESAIVTDIAGTTRDVLREHIHLDGMPLHIIDTAGLRDTTDEVERIGIERAWSEIAS 294

Query: 306 ADVVLHLLDARSGMTGDDETI----AARFPRGVPVVRVINKTDLTGVAPDVAKLNGSGDA 361
           AD VL ++D       D   I      R P+ + V  V NK DLTG       L  + + 
Sbjct: 295 ADRVLFMVDGTDTAAVDPHEIWPDFIDRLPKAMGVTVVRNKADLTG-----EPLEATEEQ 349

Query: 362 DLSEVRLSAKMGDGISLLRGELLRIAGWQAGAESVYLARERHLIALRAAQNHLGLAAEHA 421
             S  R+SAK G G+  L+  L  + G+Q+  E  ++AR RHL AL  A  HL L     
Sbjct: 350 GYSVYRISAKTGLGVDALKQHLKSLMGYQSNLEGGFIARRRHLEALEQASEHLQLGKVQL 409

Query: 422 DQNSQALDLFAEELRLAQDQLNSITGEFTSDDLLGVIFSRFCIGK 466
           +    A +L AEELR+AQ  L+ ITGEFTSDDLLG IFS FCIGK
Sbjct: 410 EV-YLAGELLAEELRMAQQALSEITGEFTSDDLLGKIFSSFCIGK 453