Pairwise Alignments

Query, 466 a.a., tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE from Paraburkholderia sabiae LMG 24235

Subject, 478 a.a., tRNA modification GTPase TrmE (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  231 bits (588), Expect = 5e-65
 Identities = 181/488 (37%), Positives = 248/488 (50%), Gaps = 46/488 (9%)

Query: 9   IVAIATAPGRGGIGVVRISFGRAGEAAAQPMMQALTGQAL---APRHASYVPFL------ 59
           I AIAT PG GG+G++RIS          P   A+ G+     +PR A + P+       
Sbjct: 7   IAAIATPPGHGGVGIIRIS---------GPDSHAILGRLFLPASPRFAGFRPWTLHRGRA 57

Query: 60  -DSGGNALDRGIALYFPAPHSYTGEHVLELQGHGGPIVLQLVLQRCIDAGRAFGLRLAEP 118
            D+ G  LD  +A+  P P ++TGE V E+  HGGP VL  VL+    A  A G RLA  
Sbjct: 58  CDAMGAPLDDVLAVAMPGPRTFTGEDVAEIHCHGGPAVLAAVLE----AACACGARLAGR 113

Query: 119 GEFTRRAFLNDKLDLAQAEAVADLIEASTEAAARSAGRSLDGAFSRDIHALVEDVITLRM 178
           GEFTRRAFLN ++DL QAEAVA++I A  +   R A   L G     +  L   ++ LR 
Sbjct: 114 GEFTRRAFLNGRMDLTQAEAVAEMIAAPAQGGLRLAQARLQGLLGTRVAELRARLLDLRA 173

Query: 179 LVEATLDFPEEEIDFLEAADARGKLARIRERLALVLSEARQGALLREGLSVVLAGQPNVG 238
            +   +DFPE+E+D L       +   +   +  +LS   +G   +EG  VVLAG  N G
Sbjct: 174 QLCVAVDFPEDEVDCLAPEAFVAECDAVAAGVRGLLSAHERGRCWQEGALVVLAGHVNAG 233

Query: 239 KSSLLNALAGAELAIVTPIAGTTRDKVAQTIQVEGIPLHVIDTAGLRETEDEVEKIGIER 298
           KSSL+NAL G   AIVT + GTTRD + + +Q+ G+P+ ++DTAGLR+T D VE+ G+  
Sbjct: 234 KSSLMNALLGRRRAIVTDMPGTTRDFIEEPVQLAGLPVRLVDTAGLRDTGDIVEQEGVRI 293

Query: 299 TWGEIERADVVLHLLDARSGMTGDDETIAARFPR------------GVPVVRVINKTDLT 346
           +   + +AD+VL ++DA +G+ G  E    R  R            G  V+ V+NKTDL 
Sbjct: 294 SRDLVAQADLVLLVVDAAAGL-GHAERELLRHVRDQHAQVGRPGRPGGRVLVVLNKTDLA 352

Query: 347 GVAPDVAKLNGSGDADLSEVRLSAKMGDGISLLRGE-----LLRIAGWQAGA--ESVYLA 399
             A    +     +     V +SA  G G+  L        L  + G  AG   ES  LA
Sbjct: 353 AEASAAFRCPTEVEG-CPCVAVSALRGLGVDELAAAARAMVLAGLGGDDAGGEPESGDLA 411

Query: 400 RE-RHLIALRAAQNHLGLAAEHADQNSQALDLFAEELRLAQDQLNSITGEFTSDDLLGVI 458
              R    LR A + L        +     DL +  L  A   L+ ITGE T  ++L  I
Sbjct: 412 PNLRQAQVLRRALDELDALVADV-RAGVPYDLCSVRLDGACAVLSEITGETTPAEVLEHI 470

Query: 459 FSRFCIGK 466
           FS FCIGK
Sbjct: 471 FSSFCIGK 478