Pairwise Alignments

Query, 466 a.a., tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE from Paraburkholderia sabiae LMG 24235

Subject, 429 a.a., tRNA modification GTPase TrmE (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  254 bits (649), Expect = 4e-72
 Identities = 167/463 (36%), Positives = 244/463 (52%), Gaps = 38/463 (8%)

Query: 7   DPIVAIATAPGRGGIGVVRISFGRAGEAAAQPMMQALTGQALAPRHASYVPFLDSGGNAL 66
           D I A+A+APG+ G+ V+RIS  RA  A      + L G     +  S     DS G+ +
Sbjct: 2   DTIFALASAPGKSGVAVLRISGSRAFHAG-----RVLAGGLPDAQRTSLRKLRDSDGSVI 56

Query: 67  DRGIALYFPAPHSYTGEHVLELQGHGGPIVLQLVLQRCIDAGRAFGLRLAEPGEFTRRAF 126
           D  + L F +P+S+TGE  +E Q HG P ++  ++    +     GLRLA+PGEFTRRA 
Sbjct: 57  DEALVLAFESPNSFTGEDCVEFQTHGSPAIIAALMN---ELSALPGLRLAQPGEFTRRAL 113

Query: 127 LNDKLDLAQAEAVADLIEASTEAAARSAGRSLDGAFSRDIHALVEDVITLRMLVEATLDF 186
            N+++DLAQ E +ADLIEA TEA  + A R+  G   + +    +D++    L+E T+DF
Sbjct: 114 ENNRMDLAQVEGLADLIEAETEAQRKQALRTFSGELGQKVELWRKDLVRAMALLEVTIDF 173

Query: 187 PEEEIDFLEAADARGKLARIRERLALVLSEARQGALLREGLSVVLAGQPNVGKSSLLNAL 246
            +EE+      + +  L R+ + LA   +       +R G  V + G PNVGKSSLLN L
Sbjct: 174 ADEEVPEDVYPEVQELLGRVSQNLAAESAGTHAAERIRHGFEVAILGAPNVGKSSLLNRL 233

Query: 247 AGAELAIVTPIAGTTRDKVAQTIQVEGIPLHVIDTAGLRETEDEVEKIGIERTWGEIERA 306
           AG E AI + IAGTTRD V   + ++G+P+ V+DTAGLRET+DE+E+IGI R     E A
Sbjct: 234 AGREAAITSSIAGTTRDVVEVRLDLDGLPVTVLDTAGLRETQDEIEQIGISRAMARAESA 293

Query: 307 DVVLHLLDARSGMTGDDETIAARFPRGVPVVRVINKTDLTGVAPDVAKLNGSGD--ADLS 364
           D+ + L++              R P G+            GVA D   +    D     S
Sbjct: 294 DLRIILIE------------DGRLPSGL------------GVADDDILVQAKSDILPSSS 329

Query: 365 EVRLSAKMGDGIS-LLRGELLRIAGWQAGAESVYLARERHLIALRAAQNHLGLAAEHADQ 423
           E  +S+  G GI  L++    R++   A A +      RH +A+ +A   L LA     +
Sbjct: 330 EFAISSVTGRGIDRLVKAVSHRLSLRAASAGTA--THVRHRLAISSAVESLDLAKTKISE 387

Query: 424 NSQALDLFAEELRLAQDQLNSITGEFTSDDLLGVIFSRFCIGK 466
               ++L  E+LR A   L S+ G    + +L  IF+ FC+GK
Sbjct: 388 GF-PVELVIEDLRQALVDLESLIGRVGVEQVLDEIFANFCLGK 429