Pairwise Alignments

Query, 466 a.a., tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE from Paraburkholderia sabiae LMG 24235

Subject, 453 a.a., tRNA modification GTPase TrmE (RefSeq) from Shewanella sp. ANA-3

 Score =  422 bits (1085), Expect = e-122
 Identities = 234/465 (50%), Positives = 315/465 (67%), Gaps = 18/465 (3%)

Query: 6   SDPIVAIATAPGRGGIGVVRISFGRAGEAAAQPMMQALTGQALAPRHASYVPFLDSGGNA 65
           +D IVA ATAPGRGG+G++RIS  +A + A      A+ G    PR+A Y  F ++ G  
Sbjct: 3   TDTIVAQATAPGRGGVGIIRISGDKATDVA-----MAVLGHLPKPRYADYCDFKNASGQV 57

Query: 66  LDRGIALYFPAPHSYTGEHVLELQGHGGPIVLQLVLQRCIDAGRAFGLRLAEPGEFTRRA 125
           +D+GIAL+F  P+S+TGE VLELQGHGG IVL ++++R ++     G+R+A+PGEF+ +A
Sbjct: 58  IDQGIALFFKGPNSFTGEDVLELQGHGGQIVLDMLIKRVLEVE---GIRIAKPGEFSEQA 114

Query: 126 FLNDKLDLAQAEAVADLIEASTEAAARSAGRSLDGAFSRDIHALVEDVITLRMLVEATLD 185
           F+NDKLDL QAEA+ADLI+A++E AA+SA +SL G FS+++H LV+ V  LR+ VEA +D
Sbjct: 115 FMNDKLDLTQAEAIADLIDATSEQAAKSALQSLQGEFSKEVHELVDQVTHLRLYVEAAID 174

Query: 186 FPEEEIDFLEAADARGKLARIRERLALVLSEARQGALLREGLSVVLAGQPNVGKSSLLNA 245
           FP+EE+DFL        L +I ++L+ V + A+QG+++REG+ VV+AG+PN GKSSLLNA
Sbjct: 175 FPDEEVDFLSDGKIANALYKIIDKLSAVQASAKQGSIIREGMKVVIAGRPNAGKSSLLNA 234

Query: 246 LAGAELAIVTPIAGTTRDKVAQTIQVEGIPLHVIDTAGLRETEDEVEKIGIERTWGEIER 305
           LAG E AIVT IAGTTRD + + I ++G+PLH+IDTAGLR+T D VE+IGIER W EI  
Sbjct: 235 LAGKESAIVTEIAGTTRDVLREHIHLDGMPLHIIDTAGLRDTTDTVEQIGIERAWNEINS 294

Query: 306 ADVVLHLLDARSGMTGDDETI----AARFPRGVPVVRVINKTDLTGVAPDVAKLNGSGDA 361
           AD VL ++D  +    D   I      R P  + V  V NK DLTG       L  + + 
Sbjct: 295 ADRVLFMVDGTTTDAVDPHDIWPDFINRLPANLGVTVVRNKADLTG-----ENLAMTEEK 349

Query: 362 DLSEVRLSAKMGDGISLLRGELLRIAGWQAGAESVYLARERHLIALRAAQNHLGLAAEHA 421
             S  R+SAK G G+  L+  L  + G+++  E  ++AR RHL AL  A +HL L  E  
Sbjct: 350 GYSVYRISAKTGLGVEELKQHLKSLMGYKSNLEGGFIARRRHLEALDVAASHLQLGKEQL 409

Query: 422 DQNSQALDLFAEELRLAQDQLNSITGEFTSDDLLGVIFSRFCIGK 466
            +   A +L AEELR+AQ  L+ ITG FTSDDLLG IFS FCIGK
Sbjct: 410 -EIYLAGELLAEELRMAQLALSEITGRFTSDDLLGKIFSSFCIGK 453