Pairwise Alignments

Query, 386 a.a., ABC transporter substrate-binding protein from Paraburkholderia sabiae LMG 24235

Subject, 381 a.a., branched-chain amino acid ABC transporter substrate-binding protein from Herbaspirillum seropedicae SmR1

 Score =  442 bits (1137), Expect = e-129
 Identities = 218/378 (57%), Positives = 285/378 (75%)

Query: 7   WVRTAIAMALVCGTSAAIAQVKIGVTLSTTGPAASLGIPEKNTIALLPKEIAGKSVQYIV 66
           + R  +A+AL      A A + +GVT+STTGPAASLGIPEKNTIALLP  IAG  V YI+
Sbjct: 3   FARPLLALALAGCALVARADINVGVTVSTTGPAASLGIPEKNTIALLPTTIAGHKVNYII 62

Query: 67  LDDASDTSRAVQNTRKLIDEDHVDAIIGSTVTPNSLAMLDPISEGKTPMISLAASAAIIS 126
           LDDASDT++AV+N R+ + E++VD I+GS+V+PNS++M++  ++ +TPMISLAA+A I+ 
Sbjct: 63  LDDASDTTQAVKNARRFVSENNVDVIVGSSVSPNSISMIEVAADAQTPMISLAAAARIVE 122

Query: 127 PMDAKRSWAFKTPQNDGLMADAIAEYMEKHGVKSVAFIGFADAYGENWYNVFSKAAEAHH 186
           PMDAK+ W FKTPQND +M+ AIA  M   G + +AFIG+++AYGE WY  F KAA    
Sbjct: 123 PMDAKKKWVFKTPQNDIMMSLAIARDMVARGYQRIAFIGYSNAYGEGWYEEFKKAAGLKK 182

Query: 187 LKLVANERYNRTDASVTGQVLKIAASNPDAVLIAGSGTPSALPAKALKERGYKGKIYQTH 246
           L+LVANER+  TD+S T Q LK+ A+ PDA+LIA SGTP+ +P +ALKERG+KG+IYQTH
Sbjct: 183 LELVANERFAPTDSSTTAQALKLVAAKPDAILIAASGTPAVVPQRALKERGFKGQIYQTH 242

Query: 247 GVANNDFLRVCGKDCEGELLPAGPILVADQLPDSNPVKKSSLAYKNAYEKAYGAGSVATF 306
           GVAN DFLRV GK  +G LLPAGP+LVA QLP SNP++K +L Y   YE  +G  SV+ F
Sbjct: 243 GVANADFLRVGGKMLDGTLLPAGPVLVAAQLPASNPIRKVALDYTTKYEAVHGKDSVSLF 302

Query: 307 GGHAWDAGQMLQRAIPEALKKGQPGTEAFRVALREALENVKDLPLSHGIMNITTTDHNGL 366
           GG+AWDAG +L+ AIP ALK  +PGT  FR ALR+ LE  K++   HG+  +++TDH GL
Sbjct: 303 GGYAWDAGVLLRWAIPVALKGAKPGTPEFRAALRDVLEATKEVTGVHGVYTMSSTDHLGL 362

Query: 367 DKRARVIVEISDGKWKLQ 384
           D+RA V+V+I DG W+ Q
Sbjct: 363 DQRAAVMVKIVDGAWQYQ 380