Pairwise Alignments

Query, 386 a.a., ABC transporter substrate-binding protein from Paraburkholderia sabiae LMG 24235

Subject, 381 a.a., branched-chain amino acid ABC transporter substrate-binding protein from Herbaspirillum seropedicae SmR1

 Score =  344 bits (882), Expect = 3e-99
 Identities = 171/383 (44%), Positives = 249/383 (65%), Gaps = 4/383 (1%)

Query: 3   KTKLWVRTAIAMALVCGTSAAIAQVKIGVTLSTTGPAASLGIPEKNTIALLPKEIAGKSV 62
           KTKL ++  +  A++     A A++ IGV +S TGP + LGIP KN  AL P+ IAG+ V
Sbjct: 2   KTKLAIKAGVLAAMLACAGIAHAELTIGVVMSLTGPGSGLGIPAKNGFALWPETIAGEKV 61

Query: 63  QYIVLDDASDTSRAVQNTRKLIDEDHVDAIIGSTVTPNSLAMLDPISEGKTPMISLAASA 122
           + I+LDDA+D ++A +N R+L+ ED VD IIGS   P +LA+ D   E +T  ++++   
Sbjct: 62  KMIILDDATDPTQASKNARRLVAEDKVDLIIGSAAVPPTLAIADVALETQTVQLAISP-- 119

Query: 123 AIISPMDAKRSWAFKTPQNDGLMADAIAEYMEKHGVKSVAFIGFADAYGENWYNVFSKAA 182
             I   + K +W F+ PQ+  +MA  +   M+K GVK++ F+G++D+YGENW     + A
Sbjct: 120 --IETAEGKDAWTFRLPQSTAVMAGGVVNQMKKLGVKTIGFLGYSDSYGENWLKEVQRLA 177

Query: 183 EAHHLKLVANERYNRTDASVTGQVLKIAASNPDAVLIAGSGTPSALPAKALKERGYKGKI 242
            A  +K+   ER++R D SVT Q L++ +SNPDAVL+  SG+ +A+P KAL ERGYKGKI
Sbjct: 178 TAAGMKMGTVERFSRADTSVTAQALRVVSSNPDAVLVVASGSGAAMPHKALIERGYKGKI 237

Query: 243 YQTHGVANNDFLRVCGKDCEGELLPAGPILVADQLPDSNPVKKSSLAYKNAYEKAYGAGS 302
           +QTH  A+ D +R+ GKD EG  + +GP +V + LPDSN  KK ++ +   YEK +GAGS
Sbjct: 238 FQTHSAASRDLIRLGGKDVEGAYVISGPAVVPEALPDSNASKKLAMDFVTRYEKQFGAGS 297

Query: 303 VATFGGHAWDAGQMLQRAIPEALKKGQPGTEAFRVALREALENVKDLPLSHGIMNITTTD 362
              F  H +DA  +LQ+ +PEALKK +PGT AFR AL+EALE    + ++ G +N +  D
Sbjct: 298 RNLFAAHTYDAQLVLQKVVPEALKKAKPGTPAFRAALKEALETSGPIQITQGTLNYSPKD 357

Query: 363 HNGLDKRARVIVEISDGKWKLQN 385
           H GL   AR+++ I +G WK  N
Sbjct: 358 HFGLGDDARIMLTIQNGNWKAVN 380