Pairwise Alignments

Query, 386 a.a., ABC transporter substrate-binding protein from Paraburkholderia sabiae LMG 24235

Subject, 385 a.a., amino acid ABC transporter periplasmic protein from Herbaspirillum seropedicae SmR1

 Score = 98.2 bits (243), Expect = 3e-25
 Identities = 94/352 (26%), Positives = 151/352 (42%), Gaps = 22/352 (6%)

Query: 4   TKLWVRTAIAMALVCGTSAAIAQVKIGVTLSTTGPAASLGIPEKNTIALLPKEIAGKS-- 61
           T L    A+ +      +A  A +K+GV  + TGPAA  G+  KN   L  +EI  K   
Sbjct: 5   TMLKTIPALLIGATLSQAALAADIKLGVAEALTGPAAKYGVAIKNGFTLASEEINAKGGV 64

Query: 62  ----VQYIVLDDASDTSRAVQNTRKLIDEDHVDAIIGSTVTPNSLAMLDPISEGKTPMIS 117
               +  ++ D+      A+   +KLI +D V A+ G T++ NS    DPI+     ++ 
Sbjct: 65  NGDKLALVIEDEQGKKEEAINVFKKLIFQDKVLAVFGPTLS-NSAFAADPIANAAKVVVF 123

Query: 118 LAASAAIISPMDAKRSWAFKTPQNDGLMADAIAEYMEKH-GVKSVAFI-GFADAYGENWY 175
             ++ A    + A   + F+    +  +     +   KH G+K VA I G  DA+ ++ Y
Sbjct: 124 GTSNTA--DGITAMGPFTFRNSVMEADVLPVTVKAAVKHFGIKKVAVIYGNDDAFTKSGY 181

Query: 176 NVFSKAAEAHHLKLVANERYNRTDASVTGQVLKIAASNPDAVLIAGSGTPSALPAKALKE 235
           +VF    E   + +   E Y + D     Q+ KI A NPDA++ +     +A      + 
Sbjct: 182 DVFKATLEHQKIPVTTTEAYAKGDVDFKAQLTKIKAGNPDAIVCSCLAEEAANIILQTRA 241

Query: 236 RGYKGKIYQTHGVANNDFLRVCGKDCEGELLPAGPILVADQLPDSNPVKKSSLAYKNAYE 295
            G K      +G+ N+  L    KD     L   P    +Q P       ++ A+  AY+
Sbjct: 242 LGMKQPFIGGNGL-NSPKLFEIAKDAGDNTLMGSPWSAENQTP-------ANKAFITAYK 293

Query: 296 KAYGAGSVATFGGHAWDAGQMLQRAIPEALKKGQPGTEAFRVALREALENVK 347
             +GA     F   A+DA  ++  A+      G    +  R ALR AL  VK
Sbjct: 294 AKFGA-DPDQFAAQAYDAMYIVADALKNVKLSGNLAKD--RDALRAALPAVK 342