Pairwise Alignments

Query, 386 a.a., ABC transporter substrate-binding protein from Paraburkholderia sabiae LMG 24235

Subject, 383 a.a., amino acid ABC transporter substrate-binding protein from Herbaspirillum seropedicae SmR1

 Score =  106 bits (265), Expect = 1e-27
 Identities = 105/389 (26%), Positives = 175/389 (44%), Gaps = 25/389 (6%)

Query: 3   KTKLWVRTAIAMALVCGTSAAIAQVKIGVTLSTTGPAASLGIPEKNTIALLPKEI----- 57
           KT+ +V  A+ M+L   TS A   +KIGV+   TG +A +G+  ++ + L   EI     
Sbjct: 4   KTQAFVAAAL-MSLAL-TSQAADPIKIGVSGPYTGGSAPMGVSMRDGVKLAVAEINAAGG 61

Query: 58  -AGKSVQYIVLDDASDTSRAVQNTRKLIDEDHVDAIIGSTVTPNSLAMLDPISEGKTPMI 116
             G+ +Q I  DD +   R VQ  ++LI+++ V A +G   T  +LA      E K P+I
Sbjct: 62  LLGRQIQLIERDDEAKNERGVQIAQELINKEKVVATVGFINTGVALASQRFYQEAKIPVI 121

Query: 117 SLAASAAIISPMDAKR--SWAFKTPQNDGLMADAIA-EYMEKHGVKSVAFIGFADAYGEN 173
           +  A+  +I+    K   ++ F+T   D + A  IA E ++K     VA +  +  YG+ 
Sbjct: 122 NNVATGTVITKQFEKEKDNYVFRTSAADKIQAKMIADEAVDKQKFTKVAILADSTNYGQL 181

Query: 174 WYNVFSKAAEAHHLKLVANERYNRTDASVTGQVLKIAASNPDAVLIAGSGTPSALPAKAL 233
                 K      +  VA E+YN  D  +T Q+LK       AVL  G G   A  A  +
Sbjct: 182 GREDLEKVLADKKVTPVAVEKYNIKDVDMTAQLLKSKQGGAQAVLTYGIGPELAQIANGM 241

Query: 234 KERGYKGKIYQTHGVANNDFLRVCGKDCEGELLPAGPILVADQLPDSNPVKKSSLAYKNA 293
           ++  +   I  +  ++  +F+   GK+  G  +P         + D N  K+   A+  A
Sbjct: 242 EKLNWHVPIIGSWPLSMGNFIDNSGKNGNGARMP------QTFIQDGNTPKRK--AFIEA 293

Query: 294 YEKAYGAGSV--ATFGGHAWDAGQMLQRAIPEALKKGQPGTEAFRVALREALENVKDLPL 351
           Y+KAY    +  A      +D+  +L  AI +A   G    +  R AL      V+ +  
Sbjct: 294 YQKAYKVDRMPSAVSAAQGYDSILLLAAAIKQA---GTTDGDKVRAALENLNTKVEGVVT 350

Query: 352 SHGIMNITTTDHNGLDKRARVIVEISDGK 380
           ++     T  DH  +     V+ E+ +G+
Sbjct: 351 TYD-KPFTHDDHEAIKPAMVVMGEVKNGR 378