Pairwise Alignments

Query, 386 a.a., ABC transporter substrate-binding protein from Paraburkholderia sabiae LMG 24235

Subject, 385 a.a., branched-chain amino acid ABC transporter substrate-binding protein from Herbaspirillum seropedicae SmR1

 Score =  349 bits (896), Expect = e-101
 Identities = 177/377 (46%), Positives = 252/377 (66%), Gaps = 6/377 (1%)

Query: 12  IAMALVCGTSA-----AIAQVKIGVTLSTTGPAASLGIPEKNTIALLPKEIAGKSVQYIV 66
           IA  ++ G S+     A+AQVK+GV  S+TGP + +GIP+KNT+ LLP +I    V+YI 
Sbjct: 7   IAAVVLLGMSSLAMHPALAQVKVGVVTSSTGPVSLVGIPQKNTVPLLPTKIGDLKVEYIS 66

Query: 67  LDDASDTSRAVQNTRKLIDEDHVDAIIGSTVTPNSLAMLDPISEGKTPMISLAASAAIIS 126
           LDDASD +++V   +KLI E +VDAIIG + +PN++ ++  ++E   P+++   +AA++ 
Sbjct: 67  LDDASDPTKSVTEIKKLIAEHNVDAIIGPSGSPNAMGVISFVAEAGVPLLAPVGTAAVVL 126

Query: 127 PMDAKRSWAFKTPQNDGLMADAIAEYMEKHGVKSVAFIGFADAYGENWYNVFSKAAEAHH 186
           PM  ++ W FKT QND L+A A+ + M K  VK+  FI   D +GENW  VFS  A  ++
Sbjct: 127 PMTEQKKWVFKTTQNDDLIAKALVDQMVKTKVKTAGFIAVNDPFGENWARVFSDLAAKNN 186

Query: 187 LKLVANERYNRTDASVTGQVLKIAASNPDAVLIAGSGTPSALPAKALKERGYKGKIYQTH 246
           +K+VANERY RTD SVT Q LKI A+NPDAVL+A  G  + LP   L ++GYKGKIYQTH
Sbjct: 187 IKIVANERYQRTDTSVTAQSLKIVAANPDAVLVAAPGAATVLPQTTLFDQGYKGKIYQTH 246

Query: 247 GVANNDFLRVCGKDCEGELLPAGPILVADQLPDSNPVKKSSLAYKNAYEKAYGAGSVATF 306
           G A   FL++     EG +L A  +LV  ++PDSNP KK +  Y  AY+K Y A   ATF
Sbjct: 247 GAALPAFLQLGKNKVEGTILAASLMLVLPEIPDSNPSKKVATDYIEAYKKMYNA-VPATF 305

Query: 307 GGHAWDAGQMLQRAIPEALKKGQPGTEAFRVALREALENVKDLPLSHGIMNITTTDHNGL 366
           G + +DAG +L++AIP A +K +PG++ FR ALR+ALEN K++  + G+ N++ TDH+G 
Sbjct: 306 GANVYDAGLLLEKAIPVAARKAKPGSKEFRAALRDALENTKEVVGTQGVYNMSATDHSGF 365

Query: 367 DKRARVIVEISDGKWKL 383
           D R R ++ +  G W L
Sbjct: 366 DDRGRELITVKGGNWAL 382