Pairwise Alignments

Query, 576 a.a., AMP-binding protein from Paraburkholderia sabiae LMG 24235

Subject, 549 a.a., long-chain-fatty-acid--CoA ligase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  458 bits (1178), Expect = e-133
 Identities = 236/536 (44%), Positives = 339/536 (63%), Gaps = 5/536 (0%)

Query: 29  LSESTVGQFLVDTATRFPERPAVVFREQEIRWNWREFQQEVDILAAGLLELGIEKGDRVG 88
           L E T+GQ+L   A   P++  +V+ ++ +R+ W +  Q VD +A GL+ +G+E+G  VG
Sbjct: 3   LFERTLGQWLEHWAEETPDKEYIVYSDRNLRFTWSQLNQRVDDMAKGLIAVGVERGTHVG 62

Query: 89  IWSPNRVEWLMTQFATARIGAVLVNINPAYRLAELEYALNKVNCKAIISAEKFKSSMYLQ 148
           IW+ N  +WL   +A A+IGAV V +N  Y+ AELEY     +   +      K S ++Q
Sbjct: 63  IWAANVPDWLTLLYACAKIGAVYVTVNTNYKQAELEYLCQNSDMHTLCIVNGEKDSDFVQ 122

Query: 149 MLQELAPELATATPGDLHAARLPDLRIVIRMCDTETPGMLTFSDVVERGRAAFDPAKLDA 208
           M   + PEL T   G L + R P ++ VI +   +  GM   ++++  G    D  +L  
Sbjct: 123 MTYTMLPELKTCERGHLKSERFPYMKNVIYVGQEKHRGMYNTAEILLLGNNVEDD-RLTE 181

Query: 209 IGATLDPNDPINIQFTSGTTGNPKGATLTHRNVVNNARYIAMAMRLTEEDSLCIPVPLYH 268
           + + +D +D +N+Q+TSGTTG PKG  LTH N+ NN       M+ T +D LC  VPL+H
Sbjct: 182 LKSKVDCHDVVNMQYTSGTTGFPKGVMLTHYNIANNGFLTGEHMKFTADDKLCCCVPLFH 241

Query: 269 CFGMVLAVLACVSVGAAMVFPGEAFEPGATLRAVSEEKCTALHGVPTMFIAELDHPDFST 328
           CFG+VLA + C++ G   V   E F+P   L ++ +E+CTAL+GVPTMFIAEL HP F  
Sbjct: 242 CFGVVLATMNCLTHGCTQVMV-ERFDPLVVLASIHKERCTALYGVPTMFIAELHHPMFDL 300

Query: 329 FDLTRLRTGIMAGSPCPIETMKRVVSQMHLAEITIAYGMTETSPVSFQSSTTDPLDKRTT 388
           FD++ LRTGIMAGS CP+E MK+V  +M++ ++T  YG+TE +P    +   D  D R  
Sbjct: 301 FDMSCLRTGIMAGSLCPVELMKQVEEKMYM-KVTSVYGLTEAAPGMTATRIDDSFDVRCN 359

Query: 389 TVGRIQPHLEVKVVDP-LGEIVPVGETGELCTRGYSVMKGYWGDEAKTRESI-VDGWMHT 446
           TVGR     EV+V+DP  GE  PVG  GE+C RGY+ MKGY+ +   T E I  D ++H+
Sbjct: 360 TVGRDFEFTEVRVIDPETGEECPVGVQGEMCNRGYNTMKGYYKNPEATAEVIDKDNFLHS 419

Query: 447 GDLATIDADGYCNIVGRLKDMLIRGGENIYPREIEEFLFRHPKIQSAQVFGVPDAKYGEE 506
           GDL   D DG   I GR+KDM+IRGGENIYPREIEEFL++   ++  QV G+P  KYGE 
Sbjct: 420 GDLGIKDEDGNYRITGRIKDMIIRGGENIYPREIEEFLYKLDGVKDVQVAGIPSKKYGEA 479

Query: 507 VCAWVVLRAGEYLTAEEVQEFCRGQIAHYKIPKYIRFVDELPMTVTGKVQKFVMRE 562
           V A+++L+ G  +   +V++FC+ +I+ YKIPKY+ FV E PMT +GK+QKF +++
Sbjct: 480 VGAFIILQEGVEMHESDVRDFCKNKISRYKIPKYVFFVKEFPMTGSGKIQKFRLKD 535