Pairwise Alignments

Query, 421 a.a., extracellular solute-binding protein from Paraburkholderia sabiae LMG 24235

Subject, 429 a.a., Raffinose-binding protein from Bifidobacterium breve UCC2003

 Score = 70.5 bits (171), Expect = 9e-17
 Identities = 87/350 (24%), Positives = 149/350 (42%), Gaps = 34/350 (9%)

Query: 4   RQFNARTVIAAAALAVAAAVAPFAASTAEAGTLTMNIAFKGASQRA-VWQSVIDDFKKAH 62
           ++   RT   A A+AV   +A   +STA  GT+T++  F+  S+ A  ++S++ DF+K +
Sbjct: 13  KRLAVRTAAVACAIAVGFGLAGCGSSTA--GTVTLDF-FQFKSEAADQFKSMVADFEKQN 69

Query: 63  PDIDVKASFIDEEAYKVQLPGWLSTVPPDVLNWHNGERMAYYARRGLFEDLSG----DWK 118
           P I V  +     A       ++    PDV+ ++       +A  G+F D +     D  
Sbjct: 70  PTIKVNIN-NSANAQTDLRTRFVKNRVPDVITFNGDISFGNFAASGVFYDFTDEPIVDTL 128

Query: 119 KNGWDNMYASTKESSTYNGKQ-YAAPTVYYSWGLFYRKDLFQKAGITSE--PKTWDQLMD 175
             G   +  +  +++  + K+ Y  P    + G  Y K LF+K G+  E  P TW +  D
Sbjct: 129 NPGMVQIAKNLVQTTDSSKKRLYGLPFAGNASGYIYNKALFRKVGLDPENPPTTWAEFTD 188

Query: 176 ACKKLKAAGITPFAVGGRDAWTLAGWFDYLDLRINGNAFHQKLMAGEVPYTDPRVKKVYT 235
                K AGI P      DAWT       L   +   + + +L  G+  + +        
Sbjct: 189 MLNTFKDAGINPLQGTVADAWTTQAPLASLTGTLVPESKYTELKQGKTTFQE-------- 240

Query: 236 TWKQLLDDKDFI------DNSLSYDLDAAQPFLFQGKAAMMLMGTF-ITGGFPPNVKPNM 288
            WK  ++ +  +      D  ++Y     Q F  QGKAA++ +GT+ I      N    +
Sbjct: 241 LWKTAVEKESELFTYSTADTGVTYQ-QGTQNFA-QGKAAIIPLGTYAIPQILLINPDIEL 298

Query: 289 SYFQFPIID---SNVPTAEDGPVESLHIPAKAKNKADAHTFLAFVETPEQ 335
            + Q P  D     + TA D  +  L I A  K   ++   + F+   +Q
Sbjct: 299 GFAQMPATDDASEQILTAGDDVM--LTIGANTKYPEESMKLVEFLMQKDQ 346