Pairwise Alignments

Query, 317 a.a., sugar ABC transporter permease from Paraburkholderia sabiae LMG 24235

Subject, 298 a.a., ABC transporter for Lactose, permease component 1 (from data) from Sinorhizobium meliloti 1021

 Score =  133 bits (334), Expect = 6e-36
 Identities = 84/281 (29%), Positives = 146/281 (51%), Gaps = 19/281 (6%)

Query: 46  LFLAPACFMVAVYVVWPILSSIWLSFYSWDGMTDKVFVGLTNYIELFQAPTFYTALKNNL 105
           LF+APA  ++ +++V+PI  S+W+SF S  GMT K F G  N + L+  P F  AL N +
Sbjct: 18  LFVAPALGLITLFMVYPIAWSLWMSFQSGRGMTLK-FAGFANIVRLWNDPVFIKALTNTM 76

Query: 106 IWLVLFLLAPPMGLAVALYL-----NQAVAGIRVVKSLFFAPFVLSGVVVGLIFSWFYDP 160
            +   F++  P+ + +AL L     N  + G  V ++  F P V S V   ++F   +  
Sbjct: 77  TY---FVVQVPIMILLALILASLLNNPRLVGRGVFRTAIFLPCVSSLVAYSVLFKGMFAT 133

Query: 161 TFGLFAVILGHG-----VPVLGDAHYATFGIIFAALWPQTAYCMILYLTGLTSLNSEQLE 215
              + + +   G     +P L    +A   +I A  W  T Y MI YL  L +++    E
Sbjct: 134 DGIVNSTLQAIGLAASPIPWLTHPFWAKVLVILAITWRWTGYNMIFYLAALQNIDKSIYE 193

Query: 216 AARMEGAKGWSMLWHVVLPQLRPVTFMAIVVTVIGALRSFDLISVMT--GGGPFESSTVL 273
            AR++G   W+ L H+ +P L+PV     V++ IG L+ FD +  +T   GGP  ++  L
Sbjct: 194 VARIDGVPAWARLTHLTIPLLKPVILFTTVISTIGTLQLFDEVYNLTEGKGGPSNATLTL 253

Query: 274 AYYMYDQAIKYY-RIGYSASIA--VVLFAIMLVYIVYHLRR 311
           + Y+Y+   ++   +GY+A+++  +V+   +L ++ +   R
Sbjct: 254 SLYIYNLTFRFMPNLGYAATVSYVIVVLVALLAFVQFFAAR 294